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07M_4_2014_scaffold_266

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_266_1
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

148..3552
DNA (3405bp) protein (1135aa)
rpoB; DNA-directed RNA polymerase subuit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4218949 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_266_2
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

3552..7574
DNA (4023bp) protein (1341aa)
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=4218950 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_266_3
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists


7587..7958
DNA (372bp) protein (124aa)
30S ribosomal protein S12 id=3619763 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rpsL; 30S ribosomal protein S12
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_266_4
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


7955..8425
DNA (471bp) protein (157aa)
30S ribosomal protein S7 id=3619761 bin=GWC2_OP3_44_8 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rpsG; 30S ribosomal protein S7
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_266_5
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

8419..10530
DNA (2112bp) protein (704aa)
Elongation factor G id=3619759 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
translation elongation factor G
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_266_6
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

10549..11754
DNA (1206bp) protein (402aa)
translation elongation factor tu (EC:2.7.7.4)
Elongation factor Tu id=2173690 bin=GWB2_CP_45_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_266_7
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists


11765..12067
DNA (303bp) protein (101aa)
30S ribosomal protein S10 id=3686039 bin=GWF2_OP3_38_59 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rpsJ; 30S ribosomal protein S10
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_266_8
RLO_WOR_2_51_8, WOR-2, Bacteria

Not on your lists


12161..12784
DNA (624bp) protein (208aa)
50S ribosomal protein L3 id=4218983 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplC; 50S ribosomal protein L3
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
07M_4_2014_scaffold_266_9
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists


12781..13410
DNA (630bp) protein (210aa)
50S ribosomal protein L4 n=2 Tax=Caldanaerobacter subterraneus RepID=RL4_THETN
rplD; 50S ribosomal protein L4
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_266_10
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists


13412..13690
DNA (279bp) protein (93aa)
50S ribosomal protein L23 id=3686033 bin=GWF2_OP3_38_59 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rplW; 50S ribosomal protein L23
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_266_11
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists


13690..14523
DNA (834bp) protein (278aa)
50S ribosomal protein L2 id=3686031 bin=GWF2_OP3_38_59 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rplB; 50S ribosomal protein L2
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_266_12
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


14529..14816
DNA (288bp) protein (96aa)
30S ribosomal protein S19 id=2173680 bin=GWB2_CP_45_9 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
rpsS; 30S ribosomal protein S19
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_266_13
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


14818..15156
DNA (339bp) protein (113aa)
50S ribosomal protein L22 id=4218988 bin=GWF2_OP3_43_52 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplV; 50S ribosomal protein L22
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_266_14
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists


15161..15859
DNA (699bp) protein (233aa)
30S ribosomal protein S3 id=2173676 bin=GWB2_CP_45_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
30S ribosomal protein S3
Tax=RBG_13_WOR_2_44_8_curated
07M_4_2014_scaffold_266_15
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists


15876..16292
DNA (417bp) protein (139aa)
50S ribosomal protein L16 id=3868574 bin=GWC2_OP3_44_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rplP; 50S ribosomal protein L16
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_266_16
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists


16487..16762
DNA (276bp) protein (92aa)
30S ribosomal protein S17 n=2 Tax=Caldanaerobacter subterraneus RepID=RS17_THETN
rpsQ; 30S ribosomal protein S17
Tax=RBG_13_WOR_2_44_8_curated
07M_4_2014_scaffold_266_17
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists


16766..17134
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=4219000 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplN; 50S ribosomal protein L14
Tax=RBG_13_WOR_2_44_8_curated
07M_4_2014_scaffold_266_18
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists


17134..17445
DNA (312bp) protein (104aa)
50S ribosomal protein L24 id=2002194 bin=GWB2_CP_45_9 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
50S ribosomal protein L24
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_266_19
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists


17450..18016
DNA (567bp) protein (189aa)
50S ribosomal protein L5 id=4219004 bin=GWF2_OP3_43_52 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplE; 50S ribosomal protein L5
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_266_20
RLO_WOR_2_51_8, WOR-2, Bacteria

Not on your lists


18243..18638
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ALU2_9CLOT
30S ribosomal protein S8
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
07M_4_2014_scaffold_266_21
RLO_WOR_2_51_8, WOR-2, Bacteria

Not on your lists


18648..19193
DNA (546bp) protein (182aa)
50S ribosomal protein L6 id=4219009 bin=GWF2_OP3_43_52 species=Commensalibacter intestini genus=Commensalibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplF; 50S ribosomal protein L6
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
07M_4_2014_scaffold_266_22
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


19196..19558
DNA (363bp) protein (121aa)
50S ribosomal protein L18 id=4219011 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplR; 50S ribosomal protein L18
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_266_23
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists


19562..20020
DNA (459bp) protein (153aa)
30S ribosomal protein S5 id=2002111 bin=GWB2_CP_45_9 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
30S ribosomal protein S5
Tax=RBG_13_WOR_2_44_8_curated
07M_4_2014_scaffold_266_24
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists


20022..20510
DNA (489bp) protein (163aa)
50S ribosomal protein L15 id=4262999 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rplO; 50S ribosomal protein L15
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_266_25
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


20503..21864
DNA (1362bp) protein (454aa)
Protein translocase subunit SecY id=2002106 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
secY; preprotein translocase subunit SecY
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_266_26
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

21861..22526
DNA (666bp) protein (222aa)
Adenylate kinase n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8W1_THELD
adenylate kinase
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_266_27
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

22507..23247
DNA (741bp) protein (247aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=2002102 bin=GWB2_CP_45_9 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_266_28
RLO_WOR_2_51_8, WOR-2, Bacteria

Not on your lists

23267..23485
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=uncultured bacterium RepID=K2AMH4_9BACT
infA; translation initiation factor IF-1
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
07M_4_2014_scaffold_266_29
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


23630..24040
DNA (411bp) protein (137aa)
SSU ribosomal protein S13P id=2002098 bin=GWB2_CP_45_9 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
30S ribosomal protein S13
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_266_30
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


24059..24442
DNA (384bp) protein (128aa)
Ribosomal protein S11 id=4219027 bin=GWF2_OP3_43_52 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
30S ribosomal protein S11
Tax=RBG_13_WOR-2_44_8b_curated
Displaying items 1-30 of 44 in total

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