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07M_4_2014_scaffold_1582

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1582_1

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72..350
DNA (279bp) protein (93aa)
Uncharacterized protein conserved in archaea id=5799820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61151.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
07M_4_2014_scaffold_1582_2
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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403..732
DNA (330bp) protein (110aa)
Putative uncharacterized protein id=3526825 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
07M_4_2014_scaffold_1582_3
unknown

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comp(790..1341)
DNA (552bp) protein (184aa)

This feature has no annotations

07M_4_2014_scaffold_1582_4
unknown

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comp(1310..1564)
DNA (255bp) protein (85aa)

This feature has no annotations

07M_4_2014_scaffold_1582_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1872..2819)
DNA (948bp) protein (316aa)
Signal recognition particle receptor FtsY n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBN5_METIK
signal recognition particle-docking protein FtsY
Tax=RBG_16_Micrarchaeota_36_9_curated
07M_4_2014_scaffold_1582_6
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(2851..3288)
DNA (438bp) protein (146aa)
prefoldin, subunit alpha; K04797 prefoldin alpha subunit id=18312092 bin=Haloredivivus tax=Haloredivivus
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
Prefoldin subunit alpha
07M_4_2014_scaffold_1582_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(3376..4044)
DNA (669bp) protein (223aa)
eif6; translation initiation factor 6; K03264 translation initiation factor 6 id=5044420 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
translation initiation factor IF-6
Tax=RBG_16_Micrarchaeota_36_9_curated
07M_4_2014_scaffold_1582_8
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(4153..4662)
DNA (510bp) protein (170aa)
Ribosomal protein L31e n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATZ5_9ARCH
ribosomal protein L31E
Tax=CG_Woesearch_01
07M_4_2014_scaffold_1582_9
unknown

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comp(4741..4917)
DNA (177bp) protein (59aa)

This feature has no annotations

07M_4_2014_scaffold_1582_10
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(4954..5226)
DNA (273bp) protein (91aa)
DNA-binding protein MTH_1615 n=2 Tax=Methanothermobacter thermautotrophicus RepID=DNBP_METTH
hypothetical protein
DNA-binding protein MTCT_1474 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter sp. CaT2.;"
07M_4_2014_scaffold_1582_11
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5198..5731)
DNA (534bp) protein (178aa)
30S ribosomal protein S19e n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEC6_METFS
ribosomal protein S19E (S16A)
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
07M_4_2014_scaffold_1582_12
unknown

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comp(5893..6993)
DNA (1101bp) protein (367aa)

This feature has no annotations

07M_4_2014_scaffold_1582_13
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(6953..7309)
DNA (357bp) protein (119aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|HAMAP-Rule:MF_00757}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
Ribonuclease P protein component 4 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HIQ6_PYRSN
ribonuclease P protein component 4
07M_4_2014_scaffold_1582_14
unknown

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comp(7377..7658)
DNA (282bp) protein (94aa)

This feature has no annotations

07M_4_2014_scaffold_1582_trna_1
unknown

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comp(7723..7794)
DNA (72bp)
transferRNA Gly
07M_4_2014_scaffold_1582_15
unknown

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7972..9225
DNA (1254bp) protein (418aa)

This feature has no annotations

07M_4_2014_scaffold_1582_16
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(9227..10192)
DNA (966bp) protein (322aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI32_9EURY
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EET89606.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
07M_4_2014_scaffold_1582_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10312..12432
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYF6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37489.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
07M_4_2014_scaffold_1582_18
unknown

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12474..12680
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 19 items

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