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07M_4_2014_scaffold_117

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_117_1
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
elongation factor Tu n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B66578
tufA; elongation factor Tu
Tax=RBG_16_Chloroflexi_58_14_curated
07M_4_2014_scaffold_117_2
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


123..293
DNA (171bp) protein (57aa)
50S ribosomal protein L33 id=2465304 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rpmG; 50S ribosomal protein L33
Tax=CG_Anaero_04
07M_4_2014_scaffold_117_trna_1
unknown

Not on your lists

350..422
DNA (73bp)
transferRNA Trp
07M_4_2014_scaffold_117_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

482..697
DNA (216bp) protein (72aa)
Preprotein translocase SecE subunit id=2465307 bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
secE; preprotein translocase subunit SecE
Tax=RBG_16_Chloroflexi_56_8_curated
07M_4_2014_scaffold_117_4
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

725..1417
DNA (693bp) protein (231aa)
Transcription antitermination protein nusG id=2465312 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
nusG; transcription antitermination protein NusG
Tax=RBG_16_Chloroflexi_56_8_curated
07M_4_2014_scaffold_117_5
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


1519..1944
DNA (426bp) protein (142aa)
50S ribosomal protein L11 id=2465319 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rplK; 50S ribosomal protein L11
Tax=CG_Anaero_01
07M_4_2014_scaffold_117_6
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


1995..2708
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N659_ANATU
rplA; 50S ribosomal protein L1
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
07M_4_2014_scaffold_117_7
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


2933..3463
DNA (531bp) protein (177aa)
50S ribosomal protein L10 id=2220617 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
rplJ; 50S ribosomal protein L10
Tax=CG_Anaero_04
07M_4_2014_scaffold_117_8
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


3535..3915
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 id=1927674 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rplL; 50S ribosomal protein L7/L12
Tax=BJP_IG2157_Anaerolineales_55_23
07M_4_2014_scaffold_117_9
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(3971..4648)
DNA (678bp) protein (226aa)
lexA; putative LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SHN0_9CHLR
Tax=RBG_16_Chloroflexi_51_16_curated
07M_4_2014_scaffold_117_10
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(4764..5750)
DNA (987bp) protein (329aa)
UniRef90_H1MU76 Magnesium and cobalt transport protein CorA n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1MU76_9PLAN id=1244604 bin=RBG9 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG9 organism_group=Chloroflexi
magnesium Mg(2+) and cobalt Co(2+) transport protein CorA
Tax=RBG_16_Chloroflexi_51_16_curated
07M_4_2014_scaffold_117_11
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

5977..6360
DNA (384bp) protein (128aa)
Hypothetical conserved protein id=3744448 bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
07M_4_2014_scaffold_117_12
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

6364..7461
DNA (1098bp) protein (366aa)
Putative uncharacterized protein id=1892136 bin=GWD2_Chloroflexi_49_16 species=Saccharomonospora cyanea genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_51_16_curated
07M_4_2014_scaffold_117_13
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

7461..8102
DNA (642bp) protein (214aa)
id=1892135 bin=GWD2_Chloroflexi_49_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Chloroflexi_58_14_curated
07M_4_2014_scaffold_117_14
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

8113..9384
DNA (1272bp) protein (424aa)
Major facilitator superfamily transporter n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0S8_ANATU
major facilitator superfamily transporter
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
07M_4_2014_scaffold_117_15
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

9438..9821
DNA (384bp) protein (128aa)
Putative uncharacterized protein id=1699097 bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
07M_4_2014_scaffold_117_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

10020..11369
DNA (1350bp) protein (450aa)
Major facilitator superfamily MFS_1 id=1892131 bin=GWD2_Chloroflexi_49_16 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
major facilitator superfamily transporter rbh
Tax=BJP_IG2157_Anaerolineales_55_23
07M_4_2014_scaffold_117_17
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(11453..11965)
DNA (513bp) protein (171aa)
GCN5-related N-acetyltransferase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PTP1_9CYAN
GCN5-like N-acetyltransferase
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
07M_4_2014_scaffold_117_18
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12040..12969
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169) rbh
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037F9E57 rbh
07M_4_2014_scaffold_117_19
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

13060..13956
DNA (897bp) protein (299aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URF8_ROSS1
PDZ/DHR/GLGF domain-containing protein
Tax=RBG_16_Chloroflexi_51_16_curated
07M_4_2014_scaffold_117_20
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

14037..14642
DNA (606bp) protein (202aa)
Transcriptional regulator, LuxR family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIM5_ROSCS
LuxR family transcriptional regulator
Tax=RBG_16_Chloroflexi_51_16_curated
07M_4_2014_scaffold_117_21
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14716..16515
DNA (1800bp) protein (600aa)
Adenylate/guanylate cyclase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFE8_ROSCS rbh
guanylate cyclase rbh
Tax=BJP_IG2157_Anaerolineales_55_23
07M_4_2014_scaffold_117_22
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16583..18268)
DNA (1686bp) protein (562aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TYH5_9CYAN rbh
Carboxypeptidase A2 {ECO:0000313|EMBL:KIJ73646.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
peptidase M14 carboxypeptidase A rbh
07M_4_2014_scaffold_117_23
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(18288..18731)
DNA (444bp) protein (148aa)
Mutator mutT protein n=3 Tax=Bacillus cereus RepID=R8KRE1_BACCE
MutT/Nudix family protein
Tax=CG_Anaero_04
07M_4_2014_scaffold_117_24
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(18799..19722)
DNA (924bp) protein (308aa)
ribF; riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin kinase/FMN adenylyltransferase id=2037316 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_51_16_curated
07M_4_2014_scaffold_117_25
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(19840..20769)
DNA (930bp) protein (310aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B id=2037312 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_56_8_curated
07M_4_2014_scaffold_117_26
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(20891..21847)
DNA (957bp) protein (319aa)
Putative uncharacterized protein id=4826938 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
07M_4_2014_scaffold_117_27
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21890..22180)
DNA (291bp) protein (97aa)
Ribosome-binding factor A id=2026499 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
rbfA; ribosome-binding factor A
Tax=BJP_IG2157_Anaerolineales_55_23
07M_4_2014_scaffold_117_28
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(22302..24071)
DNA (1770bp) protein (590aa)
Translation initiation factor IF-2 id=2026497 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
infB; translation initiation factor IF-2
Tax=RBG_16_Chloroflexi_51_16_curated
07M_4_2014_scaffold_117_29
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(24161..24463)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZB7_ANATU
hypothetical protein
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
Displaying items 1-30 of 60 in total

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