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07M_4_2014_scaffold_110

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Displaying items 1-30 of 68 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_110_1
R_OD1_Yanofskybacteria_44_12, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(296..766)
DNA (471bp) protein (157aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=5803001 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S7
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_44_12_curated
07M_4_2014_scaffold_110_2

Not on your lists


comp(788..1195)
DNA (408bp) protein (136aa)
30S ribosomal protein S12 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZU8_9BACT
30S ribosomal protein S12 {ECO:0000313|EMBL:KKR10198.1}; TaxID=1618813 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
30S ribosomal protein S12
07M_4_2014_scaffold_110_3
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(1209..2231)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YTD6_9BACT
Rod shape-determining protein mreB {ECO:0000313|EMBL:KKS66127.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
rod shape-determining protein MreB
07M_4_2014_scaffold_110_4

Not on your lists

comp(2320..3606)
DNA (1287bp) protein (429aa)
murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA id=3012636 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA {ECO:0000313|EMBL:KKQ59646.1}; TaxID=1618936 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_38_16.;"
07M_4_2014_scaffold_110_5
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(3708..4160)
DNA (453bp) protein (151aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037BA162
rpsI; 30S ribosomal protein S9
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
07M_4_2014_scaffold_110_6
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(4167..4550)
DNA (384bp) protein (128aa)
50S ribosomal protein L13 n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PAY4_DEFDS
rplM; 50S ribosomal protein L13
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
07M_4_2014_scaffold_110_7
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists


comp(4519..4926)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D107D
rplQ; 50S ribosomal protein L17
Tax=RBG_16_OP11_39_9b_curated
07M_4_2014_scaffold_110_8

Not on your lists

comp(4944..5918)
DNA (975bp) protein (325aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FE435
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKQ56761.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
07M_4_2014_scaffold_110_9
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(6026..7147)
DNA (1122bp) protein (374aa)
Cell division protein FtsZ n=1 Tax=uncultured bacterium RepID=K2F3Y6_9BACT
cell division protein FtsZ rbh
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
07M_4_2014_scaffold_110_10
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(7488..8735)
DNA (1248bp) protein (416aa)
rrs:RoseRS_3793 cell division protein FtsA; K03590 cell division protein FtsA id=8903 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
cell division protein FtsA
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
07M_4_2014_scaffold_110_11
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(8794..9258)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036AD8F4
Putative rRNA maturation factor {ECO:0000313|EMBL:KKP93049.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
putative rRNA maturation factor YbeY
07M_4_2014_scaffold_110_12
unknown

Not on your lists

9470..9760
DNA (291bp) protein (97aa)

This feature has no annotations

07M_4_2014_scaffold_110_13
RIFOXYD1_FULL_OD1_Kaiserbacteria_42_15_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9802..10806)
DNA (1005bp) protein (335aa)
id=2193046 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD1_FULL_OD1_Kaiserbacteria_42_15_curated
07M_4_2014_scaffold_110_14

Not on your lists

comp(10904..11218)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN16498.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=16545 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
CutA1 divalent ion tolerance protein
07M_4_2014_scaffold_110_15
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(11414..11908)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium pFosPlaG RepID=B0FB21_9BACT id=86487 bin=ACD58 species=uncultured bacterium pFosPlaG genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein
Tax=CG_CPR16-01
07M_4_2014_scaffold_110_16
unknown

Not on your lists

comp(12094..12447)
DNA (354bp) protein (118aa)

This feature has no annotations

07M_4_2014_scaffold_110_17
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(12452..12880)
DNA (429bp) protein (143aa)
membrane protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C800A
transport protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
07M_4_2014_scaffold_110_trna_3
unknown

Not on your lists

comp(13070..13155)
DNA (86bp)
transferRNA Ser
07M_4_2014_scaffold_110_18
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13208..13543)
DNA (336bp) protein (112aa)
hypothetical protein id=129679 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
07M_4_2014_scaffold_110_19
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(13540..13881)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKK8_9BACT id=129684 bin=ACD7 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=CG_Elusi_05
07M_4_2014_scaffold_110_20
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13902..14321)
DNA (420bp) protein (140aa)
Putative DNA-binding protein with PD1-like DNA-binding motif n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T233_9EURY
Putative DNA-binding protein with PD1-like DNA-binding motif {ECO:0000313|EMBL:EMR72994.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
hypothetical protein
07M_4_2014_scaffold_110_21
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(14311..14940)
DNA (630bp) protein (210aa)
Ribonuclease H (EC:3.1.26.4)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378DBB9
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
07M_4_2014_scaffold_110_22

Not on your lists

comp(15033..15782)
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91821.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Protease HtpX homolog id=2670064 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
HtpX-2 peptidase
07M_4_2014_scaffold_110_23
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(16150..16704)
DNA (555bp) protein (185aa)
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F id=74007 bin=ACD51 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
LemA family protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
07M_4_2014_scaffold_110_24
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16790..17911)
DNA (1122bp) protein (374aa)
alanine racemase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B567B5
alanine racemase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_110_25

Not on your lists

comp(18110..19777)
DNA (1668bp) protein (556aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F2027
Uncharacterized protein {ECO:0000313|EMBL:KKO02880.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07M_4_2014_scaffold_110_26

Not on your lists

comp(19896..21113)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI0003785495
Uncharacterized protein {ECO:0000313|EMBL:KKN93571.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07M_4_2014_scaffold_110_27
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

comp(21118..21798)
DNA (681bp) protein (227aa)
ABC transporter, ATPase subunit id=5800240 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
07M_4_2014_scaffold_110_28

Not on your lists

comp(21808..23442)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D5C03
Uncharacterized protein {ECO:0000313|EMBL:KKN93569.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Multidrug resistance efflux pump
07M_4_2014_scaffold_110_29
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(23871..24551)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZA78_DICPU
deoxycytidine triphosphate deaminase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
Displaying items 1-30 of 68 in total

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