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07M_4_2014_scaffold_437

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_437_1
Parcubacteria bacterium GW2011_GWF2_44_7, Parcubacteria, Bacteria

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241..1680
DNA (1440bp) protein (480aa)
Autotransporter adhesin {ECO:0000313|EMBL:KKT76662.1}; TaxID=1618970 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_7.;"
id=2193191 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
PKD domain containing protein
07M_4_2014_scaffold_437_2
R_RIF_OD1_13_49_20, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

1840..3003
DNA (1164bp) protein (388aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036F8AFA rbh
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_49_20_curated
07M_4_2014_scaffold_437_3
unknown

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3081..3368
DNA (288bp) protein (96aa)

This feature has no annotations

07M_4_2014_scaffold_437_4

Not on your lists


3382..5121
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003805103
Alanine-tRNA ligase {ECO:0000313|EMBL:KKS88872.1}; TaxID=1618907 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11.;"
Alanine-tRNA ligase
07M_4_2014_scaffold_437_5
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5868..6440
DNA (573bp) protein (191aa)
Putative uncharacterized protein id=4854919 bin=GWC2_TM7_48_9 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
07M_4_2014_scaffold_437_6
Wallemia ichthyophaga, Wallemia, Wallemiales, Wallemiomycetes, Basidiomycota, Fungi

Not on your lists

6711..7658
DNA (948bp) protein (316aa)
histone-arginine N-methyltransferase (EC:2.1.1.125)
Protein arginine N-methyltransferase 8 n=1 Tax=Wallemia ichthyophaga (strain EXF-994 / CBS 113033) RepID=R9AGC6_WALI9
Protein arginine N-methyltransferase 8 {ECO:0000313|EMBL:EOR01190.1}; TaxID=1299270 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Basidiomycota incertae sedis; Wallemiomycetes; Wallemiales; Wallemiales incertae sedis; Wallemia.;" source="Wallemia ichthyophaga (strain EXF-994 / CBS 113033).;"
07M_4_2014_scaffold_437_7
unknown

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8026..8568
DNA (543bp) protein (181aa)

This feature has no annotations

07M_4_2014_scaffold_437_8
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

9219..11021
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003749ED7
hypothetical protein
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_437_9
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11078..11302
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQ48_FILAD
translation initiation factor IF-1
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_437_10
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


11471..11863
DNA (393bp) protein (131aa)
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S13
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
07M_4_2014_scaffold_437_11
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

Not on your lists


12016..12468
DNA (453bp) protein (151aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=133286 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rpsK; 30S ribosomal protein S11
Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
07M_4_2014_scaffold_437_12
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


12434..13105
DNA (672bp) protein (224aa)
30S ribosomal protein S4 n=1 Tax=uncultured bacterium RepID=K1XFM7_9BACT
30S ribosomal protein S4 {ECO:0000313|EMBL:KKT43287.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
30S ribosomal protein S4
07M_4_2014_scaffold_437_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13729..15882
DNA (2154bp) protein (718aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase class III catalytic subunit n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLN0_9EURY
Tax=CG_Woesearch_02
07M_4_2014_scaffold_437_14
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

15919..16647
DNA (729bp) protein (243aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WK38_9EURY
anaerobic ribonucleoside-triphosphate reductase activating protein
Tax=CG_CPR10_03
07M_4_2014_scaffold_437_15

Not on your lists

16663..18252
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365DF08
Uncharacterized protein {ECO:0000313|EMBL:KKN93490.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA internalization-related competence protein ComEC/Rec2
07M_4_2014_scaffold_437_16
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

18257..19129
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ENR9_9BACT
comEC; DNA internalization competence protein
Tax=CG_CPR03_03
07M_4_2014_scaffold_437_17
unknown

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19180..19407
DNA (228bp) protein (76aa)

This feature has no annotations

07M_4_2014_scaffold_437_18
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

19525..20001
DNA (477bp) protein (159aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=56308 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
nucleoside-diphosphate kinase (EC:2.7.4.6)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
07M_4_2014_scaffold_437_19
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

20942..23623
DNA (2682bp) protein (894aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003825E53
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:KKT35748.1}; TaxID=1618829 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
P-type HAD superfamily ATPase
07M_4_2014_scaffold_437_20
unknown

Not on your lists

23849..24181
DNA (333bp) protein (111aa)

This feature has no annotations

07M_4_2014_scaffold_437_trna_1
unknown

Not on your lists

comp(23895..23969)
DNA (75bp)
transferRNA Pro
07M_4_2014_scaffold_437_21
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

24431..25072
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E9K0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
07M_4_2014_scaffold_437_22
R_OD1_44_24, Parcubacteria, Bacteria

Not on your lists

25090..26052
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036267ED
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_44_24_curated
07M_4_2014_scaffold_437_23

Not on your lists

26090..26461
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZKM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD56030.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 24 items

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