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07M_4_2014_scaffold_1180

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1180_1
CG_Falkow_02, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(121..963)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00037E29EF
bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
Tax=CG_Falkow_02
07M_4_2014_scaffold_1180_2
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1045..2904)
DNA (1860bp) protein (620aa)
VanW family protein id=12952 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
von Willebrand factor A
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
07M_4_2014_scaffold_1180_trna_1
unknown

Not on your lists

3178..3249
DNA (72bp)
transferRNA Thr
07M_4_2014_scaffold_1180_3
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

3609..6311
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1X1A8_9BACT rbh
cartilage oligomeric matrix protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
07M_4_2014_scaffold_1180_trna_2
unknown

Not on your lists

6771..6841
DNA (71bp)
transferRNA Met
07M_4_2014_scaffold_1180_trna_3
unknown

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6856..6928
DNA (73bp)
transferRNA Met
07M_4_2014_scaffold_1180_trna_4
unknown

Not on your lists

6932..7007
DNA (76bp)
transferRNA Asp
07M_4_2014_scaffold_1180_4
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

comp(7091..7963)
DNA (873bp) protein (291aa)
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 id=2720182 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good rbh
D-alanyl-D-alanine endopeptidase (fragment)
Tax=CG_CPR17-01
07M_4_2014_scaffold_1180_5
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


8256..9497
DNA (1242bp) protein (414aa)
Uncharacterized protein id=1924376 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Phenylalanyl-tRNA synthetase alpha chain
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
07M_4_2014_scaffold_1180_6

Not on your lists

9575..9865
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTJ2_PERMH
Uncharacterized protein {ECO:0000313|EMBL:CEG11447.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
07M_4_2014_scaffold_1180_7
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

9930..10418
DNA (489bp) protein (163aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
07M_4_2014_scaffold_1180_8

Not on your lists

10391..10774
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT46449.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
07M_4_2014_scaffold_1180_9
RIFOXYA2_FULL_WWE3_46_9_curated, WWE3, Bacteria

Not on your lists

10717..11283
DNA (567bp) protein (189aa)
DNA methylase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTJ1_PERMH
DNA methylase
Tax=RIFOXYA2_FULL_WWE3_46_9_curated
07M_4_2014_scaffold_1180_10
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11409..13349
DNA (1941bp) protein (647aa)
DNA gyrase subunit B (EC:5.99.1.3)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036520EF
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_1180_11
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

13933..15762
DNA (1830bp) protein (610aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative uncharacterized protein id=3736883 bin=GWC2_OD1_43_27 species=Staphylococcus epidermidis genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
07M_4_2014_scaffold_1180_12
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

16308..16853
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380871C
nusG; transcription antitermination factor
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_1180_13
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

16890..17120
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FBR2_9BACT
Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
07M_4_2014_scaffold_1180_14

Not on your lists


17339..17761
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F6758
50S ribosomal protein L11 {ECO:0000313|EMBL:KKQ97661.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
50S ribosomal protein L11
07M_4_2014_scaffold_1180_15
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

17796..18302
DNA (507bp) protein (169aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTZ3_9BACT
CMP/dCMP deaminase zinc-binding protein
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_1180_16
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

18341..18970
DNA (630bp) protein (210aa)
Thymidylate kinase n=1 Tax=uncultured bacterium RepID=K2FUM6_9BACT
thymidylate kinase
Tax=RBG_13_RIF_OD1_07_42_11_curated
07M_4_2014_scaffold_1180_17
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

18974..19666
DNA (693bp) protein (231aa)
Thymidylate synthase, flavin-dependent id=3163061 bin=GWB1_Spirochaetes_59_5 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
thymidylate synthase, flavin-dependent
Tax=RBG_13_RIF_OD1_07_42_11_curated
07M_4_2014_scaffold_1180_18
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

19675..21117
DNA (1443bp) protein (481aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D9163
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
07M_4_2014_scaffold_1180_19
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(21344..22282)
DNA (939bp) protein (313aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FFBA5
Tax=RBG_13_RIF_OD1_07_42_11_curated
07M_4_2014_scaffold_1180_20
unknown

Not on your lists

22381..22752
DNA (372bp) protein (124aa)

This feature has no annotations

Displaying 24 items

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