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07M_4_2014_scaffold_539

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_539_1
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1..201)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
07M_4_2014_scaffold_539_2
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(185..526)
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
07M_4_2014_scaffold_539_3
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

596..988
DNA (393bp) protein (131aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
07M_4_2014_scaffold_539_4
CG_CPR06_01, CG_CPR06, Bacteria

Not on your lists

comp(1060..2274)
DNA (1215bp) protein (405aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000382C51D
Tax=CG_CPR06_01
07M_4_2014_scaffold_539_5
CG_CPR06_01, CG_CPR06, Bacteria

Not on your lists

comp(2299..3117)
DNA (819bp) protein (273aa)
SspI n=1 Tax=Sphaerotilus sp. ATCC 13925 RepID=J9T2A8_9BURK
hypothetical protein
Tax=CG_CPR06_01
07M_4_2014_scaffold_539_6
CG_CPR06_01, CG_CPR06, Bacteria

Not on your lists

comp(3120..3335)
DNA (216bp) protein (72aa)
Helix-turn-helix id=4731860 bin=GWC2_OD1_43_27 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Helix-turn-helix.
Tax=CG_CPR06_01
07M_4_2014_scaffold_539_7
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3819..5339
DNA (1521bp) protein (507aa)
Recombinase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVL3_HIPMA
recombinase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
07M_4_2014_scaffold_539_trna_1
unknown

Not on your lists

comp(5193..5282)
DNA (90bp)
transferRNA Ser
07M_4_2014_scaffold_539_8
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

5609..5884
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000366A025
Translation elongation factor-like protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
07M_4_2014_scaffold_539_9

Not on your lists

5942..6403
DNA (462bp) protein (154aa)
Marine sediment metagenome DNA, contig: S06H3_S06196 {ECO:0000313|EMBL:GAI30410.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MgtC family magnesium (Mg2+) transporter id=2934053 bin=GWC1_OD1_38_17 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
magnesium transporter MgtC
07M_4_2014_scaffold_539_10
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

6503..6838
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003616A7C
Tax=CG_CPR10_02
07M_4_2014_scaffold_539_11
unknown

Not on your lists

6835..6951
DNA (117bp) protein (39aa)

This feature has no annotations

07M_4_2014_scaffold_539_12
unknown

Not on your lists

comp(7036..7176)
DNA (141bp) protein (47aa)

This feature has no annotations

07M_4_2014_scaffold_539_13
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

7600..8847
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368B626
DNA and RNA helicase
Tax=RBG_13_RIF_OD1_07_38_11_curated
07M_4_2014_scaffold_539_14
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

8859..9569
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036A01CA
metal-dependent phosphoesterase, PHP family
Tax=CG_CPR10_02
07M_4_2014_scaffold_539_15
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

9683..10144
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000360A48E
Tax=CG_CPR10_01
07M_4_2014_scaffold_539_16
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

10151..12271
DNA (2121bp) protein (707aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase id=3736743 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=CG_CPR10_01
07M_4_2014_scaffold_539_17
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

12357..13442
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037098D7
mrdB; cell wall shape-determining protein
Tax=CG_CPR10_03
07M_4_2014_scaffold_539_18
unknown

Not on your lists

comp(13597..13743)
DNA (147bp) protein (49aa)

This feature has no annotations

07M_4_2014_scaffold_539_19
unknown

Not on your lists

13763..13972
DNA (210bp) protein (70aa)

This feature has no annotations

07M_4_2014_scaffold_539_20
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

14322..15284
DNA (963bp) protein (321aa)
YadA domain-containing structural protein id=2130296 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
07M_4_2014_scaffold_539_21
RBG_19FT_COMBO_WWE3_53_11_curated, WWE3, Bacteria

Not on your lists

15287..16882
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363C326
Tax=RBG_19FT_COMBO_WWE3_53_11_curated
07M_4_2014_scaffold_539_22
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

16892..17854
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000381E4C7
Uncharacterized protein {ECO:0000313|EMBL:KKT35178.1}; TaxID=1618829 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
07M_4_2014_scaffold_539_23
CG_Kuenen_01, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

17864..19546
DNA (1683bp) protein (561aa)
Fibronectin type III domain protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CJI9_9LEPT
Tax=CG_Kuenen_01
07M_4_2014_scaffold_539_24
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

Not on your lists

19911..27323
DNA (7413bp) protein (2471aa)
Outer membrane pathogenesis protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHH8_AGRRK
YadA domain protein
Tax=RIFOXYD1_FULL_OD1_44_32_curated
07M_4_2014_scaffold_539_25
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

27652..28368
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000367D5D7
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
Displaying 26 items

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