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07M_4_2014_scaffold_509

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_509_1
unknown

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127..540
DNA (414bp) protein (138aa)

This feature has no annotations

07M_4_2014_scaffold_509_2
RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1258..1578
DNA (321bp) protein (107aa)
seg 117..128 id=86849 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated
07M_4_2014_scaffold_509_3
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

1741..2748
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RKF6_FIBSS
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
07M_4_2014_scaffold_509_4
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

2745..3326
DNA (582bp) protein (194aa)
thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IF40_ACIB4
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
07M_4_2014_scaffold_509_5
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

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3339..4220
DNA (882bp) protein (294aa)
GTP-binding protein Era n=1 Tax=sediment metagenome RepID=D9PIM2_9ZZZZ rbh
GTPase Era {ECO:0000313|EMBL:KKR97834.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
GTP-binding protein Era
07M_4_2014_scaffold_509_6
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4272..5519)
DNA (1248bp) protein (416aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DHW3_9BACT rbh
Carboxyl-terminal protease {ECO:0000313|EMBL:KKR97831.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
07M_4_2014_scaffold_509_7
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5587..6843)
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:KKR97830.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA id=3012636 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
07M_4_2014_scaffold_509_8
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6905..8251
DNA (1347bp) protein (449aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR97499.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
id=2076253 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
07M_4_2014_scaffold_509_9
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

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comp(8255..9340)
DNA (1086bp) protein (362aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=uncultured bacterium RepID=K1ZGX0_9BACT rbh
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KKR97498.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
nucleotidyltransferase
07M_4_2014_scaffold_509_10
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9334..10422)
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR97497.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
Glucose-1-phosphate thymidyltransferase id=4889289 bin=GWC2_OP3-like_45_7 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
putative glycosyltransferase
07M_4_2014_scaffold_509_11
RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10429..11241)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YLB1_9BACT
glycosyltransferase
Tax=RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated
07M_4_2014_scaffold_509_12
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(11234..12304)
DNA (1071bp) protein (357aa)
Glycosyl transferase n=1 Tax=uncultured bacterium RepID=K2A193_9BACT rbh
glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
07M_4_2014_scaffold_509_13
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

comp(12244..13071)
DNA (828bp) protein (276aa)
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKU12119.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
Predicted glycosyltransferase id=2076513 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
family 2 glycosyl transferase
07M_4_2014_scaffold_509_14

Not on your lists

comp(13175..14239)
DNA (1065bp) protein (355aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YLS5_9BACT rbh
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:KKR49295.1}; TaxID=1619047 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_40_17.;"
07M_4_2014_scaffold_509_15
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14252..15091)
DNA (840bp) protein (280aa)
DTDP-4-dehydrorhamnose reductase n=1 Tax=uncultured bacterium RepID=K1Z315_9BACT
dTDP-4-dehydrorhamnose reductase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_509_16
unknown

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comp(15066..16004)
DNA (939bp) protein (313aa)

This feature has no annotations

07M_4_2014_scaffold_509_17
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(16007..16402)
DNA (396bp) protein (132aa)
dTDP-6-deoxy-3,4-keto-hexulose isomerase n=1 Tax=Aneurinibacillus thermoaerophilus RepID=Q6T1W8_ANETH id=13999 bin=ACD18 species=Aneurinibacillus thermoaerophilus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Uncharacterized protein {ECO:0000313|EMBL:KKQ27290.1}; TaxID=1619046 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_37_14.;"
hypothetical protein
07M_4_2014_scaffold_509_18
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16399..17454)
DNA (1056bp) protein (352aa)
ppm:PPSC2_c4824 dTDP-D-glucose 4,6-dehydratase, RfbB; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=14009 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KKQ27291.1}; TaxID=1619046 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_37_14.;"
07M_4_2014_scaffold_509_19
RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17460..17990)
DNA (531bp) protein (177aa)
nudF; NUDIX hydrolase (EC:3.6.1.13) id=14624277 bin=bin5_DeltaP species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated
07M_4_2014_scaffold_509_20
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17971..18387)
DNA (417bp) protein (139aa)
Histidine triad (HIT) protein {ECO:0000313|EMBL:KKR96872.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
Histidine triad (HIT) protein id=4501555 bin=GWA2_OP3_52_12 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
histidine triad (HIT) protein
07M_4_2014_scaffold_509_21
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

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comp(18403..20142)
DNA (1740bp) protein (580aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS57632.1}; TaxID=1619039 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_42_32.;"
Putative membrane protein id=2169530 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
07M_4_2014_scaffold_509_22
RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated, Magasanikbacteria, Parcubacteria, Bacteria

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20197..22335
DNA (2139bp) protein (713aa)
hypothetical protein id=4501564 bin=GWA2_OP3_52_12 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors rbh
Tax=RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated
07M_4_2014_scaffold_509_23
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22599..24260)
DNA (1662bp) protein (554aa)
Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica RepID=K0S2T2_THAOC
Uncharacterized protein {ECO:0000313|EMBL:KKR96876.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
hypothetical protein
Displaying 23 items

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