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07M_4_2014_scaffold_868

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_868_1
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2..478
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000381252B
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADL08396.1}; Flags: Precursor;; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
07M_4_2014_scaffold_868_2
unknown

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493..732
DNA (240bp) protein (80aa)

This feature has no annotations

07M_4_2014_scaffold_868_3
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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760..1173
DNA (414bp) protein (138aa)
putative lipoprotein id=120697 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
07M_4_2014_scaffold_868_4
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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1293..1640
DNA (348bp) protein (116aa)
hypothetical protein cdivTM_30108 id=1816811 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
07M_4_2014_scaffold_868_5

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1739..3676
DNA (1938bp) protein (646aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT01302.1}; TaxID=1618827 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
DUF2079 domain membrane protein id=3790798 bin=GWC2_OP3-like_45_7 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
07M_4_2014_scaffold_868_6
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(3768..5414)
DNA (1647bp) protein (549aa)
hypothetical protein id=96708 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
07M_4_2014_scaffold_868_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5472..6854
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FU42_9BACT
hypothetical protein
Tax=RBG_16_Desulfobacca_60_12_curated
07M_4_2014_scaffold_868_8
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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comp(6851..8407)
DNA (1557bp) protein (519aa)
transmembrane_regions id=5801282 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
07M_4_2014_scaffold_868_9
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8469..9548)
DNA (1080bp) protein (360aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] id=5084166 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
bifunctional phosphoglucose/phosphomannose isomerase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
07M_4_2014_scaffold_868_10
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

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9681..10436
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein Tlet_1011 n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=Y1011_THELT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
07M_4_2014_scaffold_868_11
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10423..10917
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=2368393 bin=GWD1_TM7_39_7 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
07M_4_2014_scaffold_868_12
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

10919..12004
DNA (1086bp) protein (362aa)
Glucoamylase and related glycosyl hydrolase id=2345682 bin=GWD1_TM7_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
glycoside hydrolase 15-like protein
Tax=BJP_IG2158_OD1_28_51
07M_4_2014_scaffold_868_13
GWA2_OD1_38_13, Parcubacteria, Bacteria

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12004..13476
DNA (1473bp) protein (491aa)
Glycogen synthase (EC:2.4.1.21)
Glycogen synthase GlgA {ECO:0000313|EMBL:KKQ57667.1}; TaxID=1618811 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;"
Glycogen synthase id=1899170 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
07M_4_2014_scaffold_868_14
RHI_OD1_43_12, Parcubacteria, Bacteria

Not on your lists

13480..14712
DNA (1233bp) protein (411aa)
Alpha-galactosidase id=14424301 bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OD1_43_12_curated
07M_4_2014_scaffold_868_15
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

14719..16206
DNA (1488bp) protein (496aa)
Alpha-galactosidase id=14424296 bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
hypothetical protein
Tax=CG_Kuenen_03
07M_4_2014_scaffold_868_16
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

16262..17263
DNA (1002bp) protein (334aa)
Tax=BJP_IG2158_OD1_28_51
07M_4_2014_scaffold_868_17
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

17265..18137
DNA (873bp) protein (291aa)
Putative metal-dependent phosphoesterase, PHP family id=1899165 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
PHP domain-containing protein
Tax=BJP_IG2158_OD1_28_51
07M_4_2014_scaffold_868_18
unknown

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18134..18349
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 18 items

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