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07M_4_2014_scaffold_1169

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1169_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1..432)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369D442
Tax=CG_Woesearch_02
07M_4_2014_scaffold_1169_2
unknown

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comp(675..1142)
DNA (468bp) protein (156aa)

This feature has no annotations

07M_4_2014_scaffold_1169_3
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(1167..2249)
DNA (1083bp) protein (361aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV01_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL59430.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
07M_4_2014_scaffold_1169_4
AR10, Diapherotrites, DPANN, Archaea

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comp(2259..2768)
DNA (510bp) protein (170aa)
tRNA-intron endonuclease, archaea type (EC:4.6.1.16)
tRNA-splicing endonuclease; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5240690 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
07M_4_2014_scaffold_1169_5
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(2868..3266)
DNA (399bp) protein (133aa)
Inosine-5'-monophosphate dehydrogenase related protein III n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HKQ4_THES4
inosine-5'-monophosphate dehydrogenase-like protein III
Inosine-5'-monophosphate dehydrogenase related protein III {ECO:0000313|EMBL:AEK72104.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGMCC 1.5172 / 4557).;"
07M_4_2014_scaffold_1169_6

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comp(3272..4117)
DNA (846bp) protein (282aa)
ubiA; prenyltransferase (EC:2.5.1.-)
Putative 4-hydroxybenzoate octaprenyltransferase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W6K7_UNCMA
Marine sediment metagenome DNA, contig: S01H4_S05517 {ECO:0000313|EMBL:GAH05058.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07M_4_2014_scaffold_1169_7
unknown

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4162..4302
DNA (141bp) protein (47aa)

This feature has no annotations

07M_4_2014_scaffold_1169_8

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comp(4317..5075)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362FDBE
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO45540.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transcriptional regulator TrmB
07M_4_2014_scaffold_1169_9

Not on your lists

5165..6181
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003717048
Hypothetical NMT1/THI5 like family protein {ECO:0000313|EMBL:ACX33936.1}; TaxID=672203 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote AT5.;"
NMT1/THI5 like domain-containing protein
07M_4_2014_scaffold_1169_10

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6196..6969
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003824238
Putative ABC transporter permease protein {ECO:0000313|EMBL:KKW22563.1}; TaxID=1618917 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_51_35.;"
putative sulfonate ABC transporter permease
07M_4_2014_scaffold_1169_11
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6980..7783
DNA (804bp) protein (268aa)
Sulfonate ABC transporter ATP-binding lipoprotein n=1 Tax=Marinobacter sp. EN3 RepID=U7GTZ6_9ALTE
Sulfonate ABC transporter ATP-binding lipoprotein {ECO:0000313|EMBL:ERS00500.1}; TaxID=1397533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. EN3.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase
07M_4_2014_scaffold_1169_12
unknown

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8161..8436
DNA (276bp) protein (92aa)

This feature has no annotations

07M_4_2014_scaffold_1169_13
unknown

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8444..8881
DNA (438bp) protein (146aa)

This feature has no annotations

07M_4_2014_scaffold_1169_14
unknown

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9001..9468
DNA (468bp) protein (156aa)

This feature has no annotations

07M_4_2014_scaffold_1169_15
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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9566..12448
DNA (2883bp) protein (961aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Isoleucine--tRNA ligase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWE5_METFV
07M_4_2014_scaffold_1169_16
unknown

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12457..13005
DNA (549bp) protein (183aa)

This feature has no annotations

07M_4_2014_scaffold_1169_17
uncultured euryarchaeote Alv-FOS5, Euryarchaeota, Archaea

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13112..14758
DNA (1647bp) protein (549aa)
Archaeal thermosome n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBB1_9EURY rbh
Archaeal thermosome {ECO:0000313|EMBL:AAZ32099.1}; TaxID=337891 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured euryarchaeote Alv-FOS5.;"
thermosome subunit alpha
07M_4_2014_scaffold_1169_18
unknown

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comp(14856..15020)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 18 items

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