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07M_4_2014_scaffold_1070

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1070_1
R_RIF_OD1_06_34_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(259..831)
DNA (573bp) protein (191aa)
Adenylate cyclase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V5U9_DESML
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_9_curated
07M_4_2014_scaffold_1070_2
R_RIF_OD1_06_34_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(785..1690)
DNA (906bp) protein (302aa)
id=5087529 bin=OP11_3 species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
preQ(0) biosynthesis protein QueC
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_9_curated
07M_4_2014_scaffold_1070_3
R_RIF_OD1_06_34_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1671..2498)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QK01_9MYCO
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_9_curated
07M_4_2014_scaffold_1070_4
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(2571..3968)
DNA (1398bp) protein (466aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D2186
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(4086..4391)
DNA (306bp) protein (102aa)
dITP/XTP pyrophosphatase (EC:3.6.1.19)
deoxyribonucleotide triphosphate pyrophosphatase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002897540
Tax=CG_Woesearch_01
07M_4_2014_scaffold_1070_6
RBG_13_OD1_Moranbacteria_45_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4546..4860)
DNA (315bp) protein (105aa)
TrpR like protein, YerC/YecD id=120026 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
TrpR-like protein YerC/YecD
Tax=RBG_13_OD1_Moranbacteria_45_13_curated
07M_4_2014_scaffold_1070_7
GWD2_OD1_46_48, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(4942..5400)
DNA (459bp) protein (153aa)
Transcription elongation factor GreA {ECO:0000313|EMBL:KKU41926.1}; TaxID=1618623 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWD2_46_48.;"
Transcription elongation factor GreA id=4241900 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
transcription elongation factor GreA
07M_4_2014_scaffold_1070_8

Not on your lists

comp(5397..6200)
DNA (804bp) protein (268aa)
Bifunctional protein FolD n=1 Tax=Clostridium sp. CAG:533 RepID=R6AJR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKN93466.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
07M_4_2014_scaffold_1070_9
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(6206..8113)
DNA (1908bp) protein (636aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 id=3012686 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_10
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8106..8576)
DNA (471bp) protein (157aa)
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_11
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8573..9403)
DNA (831bp) protein (277aa)
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC id=2613 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
rod shape-determining protein MreC
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
07M_4_2014_scaffold_1070_12
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(9420..10472)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZ27_9BACT rbh
MreB; rod shape-determining protein MreB
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_13
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(10474..11883)
DNA (1410bp) protein (470aa)
Proline--tRNA ligase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E028_DICTD
prolyl-tRNA synthetase
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_14
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11921..12850)
DNA (930bp) protein (310aa)
Membrane-associated zinc metalloprotease id=1947693 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_15
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(12847..13362)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003747375
ribosome recycling factor
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_16
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(13364..14092)
DNA (729bp) protein (243aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit id=3423044 bin=GWA1_ZB2_49_26 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_17
unknown

Not on your lists

14168..14578
DNA (411bp) protein (137aa)

This feature has no annotations

07M_4_2014_scaffold_1070_18

Not on your lists

comp(14729..15418)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C730D
Uncharacterized protein {ECO:0000313|EMBL:KKQ57831.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
07M_4_2014_scaffold_1070_19
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(15424..16500)
DNA (1077bp) protein (359aa)
dth:DICTH_0777 mannosyl transferase id=16622 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i rbh
glycosyl transferase group 1
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_20
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(16497..17489)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000377D711
putative glycosyltransferase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
07M_4_2014_scaffold_1070_21
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(17507..18514)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YTD6_9BACT
rod shape-determining protein MreB
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_22
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

18586..19662
DNA (1077bp) protein (359aa)
id=4241930 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_23
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(19686..20213)
DNA (528bp) protein (176aa)
30S ribosomal protein S9 id=2193087 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rpsI; 30S ribosomal protein S9
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_24

Not on your lists


comp(20200..20574)
DNA (375bp) protein (125aa)
50S ribosomal protein L13 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000373B2EB
Marine sediment metagenome DNA, contig: S06H3_C01522 {ECO:0000313|EMBL:GAH97193.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplM; 50S ribosomal protein L13
07M_4_2014_scaffold_1070_25
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(20576..20929)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D107D
rplQ; 50S ribosomal protein L17
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_26
GWE2_OD1_46_45_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(20898..21641)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FE435
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKU40254.1}; TaxID=1618625 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWE2_46_45.;"
DNA-directed RNA polymerase subunit alpha
07M_4_2014_scaffold_1070_27
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(21730..22263)
DNA (534bp) protein (178aa)
30S ribosomal protein S4 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJJ5_SYNLT
30S ribosomal protein S4
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_28
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(22409..22864)
DNA (456bp) protein (152aa)
30S ribosomal protein S11 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037D367B
rpsK; 30S ribosomal protein S11
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_1070_29
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(22870..23259)
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=uncultured bacterium RepID=K2GE69_9BACT
30S ribosomal protein S13
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
07M_4_2014_scaffold_1070_30
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(23382..23597)
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA39_9FIRM
translation initiation factor IF-1
Tax=RBG_13_RIF_OD1_08_37_53_curated
Displaying items 1-30 of 34 in total

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