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07M_4_2014_scaffold_159

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Displaying items 1-30 of 58 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_159_trna_5
unknown

Not on your lists

comp(144..227)
DNA (84bp)
transferRNA Leu
07M_4_2014_scaffold_159_1
R_RIF_OD1_06_38_12b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(228..1286)
DNA (1059bp) protein (353aa)
Bifunctional phosphoglucose/phosphomannose isomerase id=1899176 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
bifunctional phosphoglucose/phosphomannose isomerase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated
07M_4_2014_scaffold_159_2
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1270..3024)
DNA (1755bp) protein (585aa)
Extracellular solute-binding protein id=3544614 bin=GWC1_OD1_38_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
putative ABC transporter substrate binding protein
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_3
R_RIF_OD1_08_43_11, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3252..3656)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EPQ6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_43_11_curated
07M_4_2014_scaffold_159_4

Not on your lists

3976..4722
DNA (747bp) protein (249aa)
Marine sediment metagenome DNA, contig: S01H1_S31136 {ECO:0000313|EMBL:GAG37904.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=5801237 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ATP synthase F0 subunit A
07M_4_2014_scaffold_159_5
GWA2_OD1_53_7_partial, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

4808..5035
DNA (228bp) protein (76aa)
ATP synthase subunit c {ECO:0000313|EMBL:KKW35155.1}; TaxID=1618650 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_53_7.;"
hypothetical protein id=5801236 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
atpE; ATP synthase subunit c
07M_4_2014_scaffold_159_6

Not on your lists

5050..5559
DNA (510bp) protein (170aa)
F0F1 ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=137573 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
Marine sediment metagenome DNA, contig: S01H1_S35953 {ECO:0000313|EMBL:GAG50966.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
atpF; F0F1-type ATP synthase subunit b
07M_4_2014_scaffold_159_7

Not on your lists

5549..5929
DNA (381bp) protein (127aa)
ATP synthase subunit delta n=1 Tax=uncultured bacterium RepID=K1ZG52_9BACT
Marine sediment metagenome DNA, contig: S01H1_S35953 {ECO:0000313|EMBL:GAG50962.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATP synthase F1 subunit delta
07M_4_2014_scaffold_159_8
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

5931..7457
DNA (1527bp) protein (509aa)
ttr:Tter_0065 ATP synthase F1, alpha subunit (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] id=9218 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
ATP synthase subunit alpha
Tax=BJP_IG2158_OD1_28_51
07M_4_2014_scaffold_159_9
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

7500..7865
DNA (366bp) protein (122aa)
Putative uncharacterized protein id=4783249 bin=GWC2_OD1_43_27 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_10
unknown

Not on your lists

7805..8035
DNA (231bp) protein (77aa)

This feature has no annotations

07M_4_2014_scaffold_159_11

Not on your lists

8086..8979
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00037784FB
Uncharacterized protein {ECO:0000313|EMBL:KKO02835.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATP synthase subunit gamma
07M_4_2014_scaffold_159_12
GWC1_OD1-i_45_18, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9072..10463
DNA (1392bp) protein (464aa)
ATP synthase F1, beta subunit, F-type H+-transporting ATPase subunit beta {ECO:0000313|EMBL:KKT99065.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KKT99065.1};; TaxID=1618696 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC1_45_18.;"
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14) rbh
ATP synthase subunit beta n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=ATPB_CARHZ rbh
07M_4_2014_scaffold_159_13
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

10465..10725
DNA (261bp) protein (87aa)
ATP synthase epsilon chain n=2 Tax=Proteus RepID=C0ASR7_9ENTR
atpC; ATP synthase epsilon chain
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
07M_4_2014_scaffold_159_14
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

comp(10847..11125)
DNA (279bp) protein (93aa)
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
07M_4_2014_scaffold_159_15
unknown

Not on your lists

11246..11704
DNA (459bp) protein (153aa)

This feature has no annotations

07M_4_2014_scaffold_159_16
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11986..14835
DNA (2850bp) protein (950aa)
UvrABC system protein A id=2670085 bin=GWA1_ZB2_49_26 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
excinuclease ABC subunit A
Tax=RBG_13_RIF_OD1_07_42_11_curated
07M_4_2014_scaffold_159_17
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

14839..15714
DNA (876bp) protein (292aa)
transmembrane_regions 222..244 id=8326 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_18
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

15711..16718
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380714F
hypothetical protein
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_19
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

16724..17644
DNA (921bp) protein (307aa)
Putative glucokinase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PY30_9CLOT
ROK family protein
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_20
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

17892..18164
DNA (273bp) protein (91aa)
Copper-sensing transcriptional repressor CsoR (Copper-sensitive operon repressor) n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=D6HQG5_9FIRM id=96005 bin=ACD63 species=Erysipelotrichaceae bacterium 5_2_54FAA genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_159_21
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

18166..19629
DNA (1464bp) protein (488aa)
Putative uncharacterized protein id=4268947 bin=GWF2_CPR3_35_18 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_CPR3_35_18 organism_group=CPR3
hypothetical protein
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_159_22
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

19611..21851
DNA (2241bp) protein (747aa)
heavy-metal transporting P-type ATPase (EC:3.6.3.4)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ETS5_9BACT
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_23
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22079..23077
DNA (999bp) protein (333aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] id=1251256 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
cystathionine beta-synthase rbh
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
07M_4_2014_scaffold_159_24
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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23050..24180
DNA (1131bp) protein (377aa)
Cystathionine gamma-lyase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AJ35_PYRYC
cystathionine gamma-lyase
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEH24553.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain CH1 / JCM 16557).;"
07M_4_2014_scaffold_159_25
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

24202..25437
DNA (1236bp) protein (412aa)
cysteine desulfurase (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F4B2_9BACT rbh
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_26
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

25596..25970
DNA (375bp) protein (125aa)
FeS cluster assembly scaffold protein NifU n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCR3_9FIRM id=136701 bin=ACD8 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
NifU domain-containing protein
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_159_27

Not on your lists

25984..26616
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI000374D2D2
Marine sediment metagenome DNA, contig: S03H2_S11980 {ECO:0000313|EMBL:GAH70340.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07M_4_2014_scaffold_159_28
unknown

Not on your lists

comp(26884..27387)
DNA (504bp) protein (168aa)

This feature has no annotations

07M_4_2014_scaffold_159_29

Not on your lists

27552..27785
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D802E
Marine sediment metagenome DNA, contig: S06H3_S06550 {ECO:0000313|EMBL:GAI19781.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glutaredoxin-like protein
Displaying items 1-30 of 58 in total

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