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07M_4_2014_scaffold_4844

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_4844_1

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comp(2..97)
DNA (96bp) protein (32aa)
Marine sediment metagenome DNA, contig: S03H2_S20534 {ECO:0000313|EMBL:GAH83011.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07M_4_2014_scaffold_4844_2
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

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comp(135..1109)
DNA (975bp) protein (325aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
Putative uncharacterized protein id=4367364 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated
07M_4_2014_scaffold_4844_3
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

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comp(1114..1473)
DNA (360bp) protein (120aa)
S23 ribosomal protein id=3794658 bin=GWB1_Berkelbacteria_38_5 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
S23 ribosomal protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
07M_4_2014_scaffold_4844_4

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comp(1599..2018)
DNA (420bp) protein (140aa)
50S ribosomal protein L22 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003631AAB
Marine sediment metagenome DNA, contig: S03H2_S20534 {ECO:0000313|EMBL:GAH83013.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplV; 50S ribosomal protein L22
07M_4_2014_scaffold_4844_5
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(2023..2328)
DNA (306bp) protein (102aa)
Ribosomal protein S19 id=2154530 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rpsS; ribosomal protein S19 (BS19)
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_4844_6
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(2330..3172)
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Caloramator australicus RC3 RepID=I7KTZ0_9CLOT
rplB; 50S ribosomal protein L2
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_4844_7
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(3197..3595)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000376BEC7
50S ribosomal protein L25
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_4844_8
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(3582..4235)
DNA (654bp) protein (218aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=96630 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L4P
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_4844_9
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(4243..4839)
DNA (597bp) protein (199aa)
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L3
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_4844_10
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(4996..5340)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035D46DD
rpsJ; 30S ribosomal protein S10
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_4844_11
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(5371..6567)
DNA (1197bp) protein (399aa)
translation elongation factor Tu; K02358 elongation factor Tu id=15189778 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
translation elongation factor Tu
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_4844_12
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(6741..7832)
DNA (1092bp) protein (364aa)
Elongation factor G id=3736614 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
elongation factor G
Tax=RBG_13_RIF_OD1_08_37_53_curated
Displaying 12 items

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