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07M_4_2014_scaffold_5483

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_5483_1
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

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comp(3..185)
DNA (183bp) protein (61aa)
Phosphoribosyltransferase {ECO:0000313|EMBL:KKR80552.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
07M_4_2014_scaffold_5483_2

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227..1330
DNA (1104bp) protein (368aa)
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:KKR47842.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
type IV pilus assembly protein PilM
07M_4_2014_scaffold_5483_3
unknown

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1599..2246
DNA (648bp) protein (216aa)

This feature has no annotations

07M_4_2014_scaffold_5483_4
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

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2361..2693
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU87138.1}; TaxID=1618445 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_47_9.;"
transmembrane_regions id=5803084 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
07M_4_2014_scaffold_5483_5
R_OD1_Nomurabacteria_42_16, Nomurabacteria, Parcubacteria, Bacteria

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2701..3240
DNA (540bp) protein (180aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_42_16_curated
07M_4_2014_scaffold_5483_6
R_OD1_Kaiserbacteria_48_10, Kaiserbacteria, Parcubacteria, Bacteria

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3242..3553
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_48_10_curated
07M_4_2014_scaffold_5483_7
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

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3622..5328
DNA (1707bp) protein (569aa)
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretion system protein E
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
07M_4_2014_scaffold_5483_8
Parcubacteria bacterium GW2011_GWE2_40_8, Parcubacteria, Bacteria

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5342..5728
DNA (387bp) protein (129aa)
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:KKR77444.1}; TaxID=1618951 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_40_8.;"
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=5803080 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
07M_4_2014_scaffold_5483_9
GWB1_OD1_43_8, Parcubacteria, Bacteria

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5721..6785
DNA (1065bp) protein (355aa)
Twitching motility protein {ECO:0000313|EMBL:KKT20613.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
twitching motility protein; K02669 twitching motility protein PilT id=5803079 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
07M_4_2014_scaffold_5483_10
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists

6790..7995
DNA (1206bp) protein (402aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR75239.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Type II secretion system protein
07M_4_2014_scaffold_5483_11
RLO_OD1_41_13, Parcubacteria, Bacteria

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comp(8368..9075)
DNA (708bp) protein (236aa)
Transposase id=5227387 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
07M_4_2014_scaffold_5483_12
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

9174..9677
DNA (504bp) protein (168aa)
Prepilin peptidase {ECO:0000313|EMBL:KKT19136.1}; Flags: Fragment;; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Prepilin peptidase-1 id=5227292 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
peptidase A24A domain-containing protein
Displaying 12 items

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