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07M_4_2014_scaffold_5932

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_5932_1
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

181..573
DNA (393bp) protein (131aa)
HEPN domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXK5_FERPA
HEPN domain protein
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_5932_2
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

558..911
DNA (354bp) protein (118aa)
DNA polymerase beta domain protein region n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXK4_FERPA
DNA polymerase subunit beta
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_5932_3
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists


1110..1301
DNA (192bp) protein (64aa)
50S ribosomal protein L5 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036A0E58
50S ribosomal protein L5 {ECO:0000313|EMBL:KKR80809.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
50S ribosomal protein L5
07M_4_2014_scaffold_5932_4

Not on your lists


1650..2021
DNA (372bp) protein (124aa)
30S ribosomal protein S8 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037C1A94
30S ribosomal protein S8 {ECO:0000313|EMBL:KKR59817.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
rpsH; 30S ribosomal protein S8
07M_4_2014_scaffold_5932_5
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists


2006..2566
DNA (561bp) protein (187aa)
50S ribosomal protein L6 id=5227339 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplF; 50S ribosomal protein L6
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_5932_6
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


2579..2932
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=RL18_THENN
rplR; 50S ribosomal protein L18
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
07M_4_2014_scaffold_5932_7
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists


2877..3380
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036A7D71
30S ribosomal protein S5 {ECO:0000313|EMBL:KKR74414.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
SSU ribosomal protein S5P
07M_4_2014_scaffold_5932_8
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists


3800..4744
DNA (945bp) protein (315aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5803331 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
preprotein translocase subunit SecY
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_5932_9
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

4789..4998
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70872.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
07M_4_2014_scaffold_5932_10
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

5072..5380
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_5932_11
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

5443..6141
DNA (699bp) protein (233aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000313|EMBL:KKT21578.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Methionine aminopeptidase id=2824200 bin=GWC1_OD1_38_17 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
07M_4_2014_scaffold_5932_12
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

6138..6536
DNA (399bp) protein (133aa)
yrrK; putative Holliday junction resolvase (EC:3.1.-.-)
PAS/PAC sensor signal transduction histidine kinase id=1779307 bin=GWE2_Spirochaete_31_10 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_5932_13
GWF2_OD1_42_19, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

6545..7291
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036375A1
Glycosyl transferase family protein {ECO:0000313|EMBL:KKS46643.1}; TaxID=1618659 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWF2_42_19.;"
dolichol-P-glucose synthetase
07M_4_2014_scaffold_5932_14
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

7284..8312
DNA (1029bp) protein (343aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
hypothetical protein, partial n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000373656E
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_5932_15
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists

8358..9458
DNA (1101bp) protein (367aa)
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KKR81870.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
Type IV pilus assembly protein PilM id=5227483 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
pilM; Type IV pilus assembly protein
07M_4_2014_scaffold_5932_16
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

9460..9996
DNA (537bp) protein (179aa)
seg id=5803263 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_5932_17
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

9950..10507
DNA (558bp) protein (186aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_5932_18
unknown

Not on your lists

10500..10823
DNA (324bp) protein (108aa)

This feature has no annotations

07M_4_2014_scaffold_5932_19
GWA2_OD1_39_10_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

10940..11182
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCQ7_DICT6
Uncharacterized protein {ECO:0000313|EMBL:KKQ91954.1}; TaxID=1618611 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_39_10.;"
hypothetical protein
07M_4_2014_scaffold_5932_trna_1
unknown

Not on your lists

11550..11621
DNA (72bp)
transferRNA Val
07M_4_2014_scaffold_5932_trna_2
unknown

Not on your lists

11626..11698
DNA (73bp)
transferRNA Val
Displaying 21 items

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