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07M_4_2014_scaffold_15539

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_15539_1
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

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1..159
DNA (159bp) protein (53aa)
Elongation factor P id=4242105 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
translation elongation factor P (EF-P)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
07M_4_2014_scaffold_15539_trna_1
unknown

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150..220
DNA (71bp)
transferRNA Ala
07M_4_2014_scaffold_15539_2

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223..693
DNA (471bp) protein (157aa)
type II restriction enzyme TaqI (EC:3.1.21.4)
Type II site-specific deoxyribonuclease n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9M3_THEAQ
Type-2 restriction enzyme TthHB8I {ECO:0000313|EMBL:KKT97298.1}; TaxID=1618931 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_15.;"
07M_4_2014_scaffold_15539_3
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(722..1384)
DNA (663bp) protein (221aa)
Modification methylase HpaI n=1 Tax=Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 RepID=R4RPP0_PHYAS
hpaIM; Modification methylase HpaI
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_15539_4
GWB2_OD1_rel_46_37, Azambacteria, Parcubacteria, Bacteria

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comp(1473..2051)
DNA (579bp) protein (193aa)
lexA; LexA repressor (EC:3.4.21.88)
Methylase protein {ECO:0000313|EMBL:KKU38485.1}; TaxID=1618618 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB2_46_37.;"
BstYI methyltransferase id=2026715 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
07M_4_2014_scaffold_15539_5
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2153..2794
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036312C9
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:ADP76496.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y4.1MC1).;"
07M_4_2014_scaffold_15539_6
R_OD1_41_19, Parcubacteria, Bacteria

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comp(3066..3506)
DNA (441bp) protein (147aa)
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ssb; single-stranded DNA-binding protein
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_15539_7
R_OD1_41_19, Parcubacteria, Bacteria

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comp(3511..3966)
DNA (456bp) protein (152aa)
30S ribosomal protein S6 id=4790087 bin=GWC2_OD1_43_27 species=Helicobacter bizzozeronii genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_15539_8
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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comp(4009..5457)
DNA (1449bp) protein (483aa)
seg 206..219 id=138084 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
Displaying 9 items

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