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07M_4_2014_scaffold_4589

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_4589_1
RLO_OD1_Nomurabacteria_44_11, Nomurabacteria, Parcubacteria, Bacteria

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275..1453
DNA (1179bp) protein (393aa)
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_44_11_curated
07M_4_2014_scaffold_4589_2

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1479..2678
DNA (1200bp) protein (400aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR59697.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
07M_4_2014_scaffold_4589_3
R_RIF_OD1_09_51_11, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

2712..2924
DNA (213bp) protein (71aa)
translation initiation factor IF-1 id=15189785 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
infA; translation initiation factor IF-1
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated
07M_4_2014_scaffold_4589_4
R_OD1_41_19, Parcubacteria, Bacteria

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3041..3424
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00038172C2
30S ribosomal protein S13
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_4589_5
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


3426..3860
DNA (435bp) protein (145aa)
30S ribosomal protein S11 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036D75F5
30S ribosomal protein S11
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
07M_4_2014_scaffold_4589_6
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


3866..4501
DNA (636bp) protein (212aa)
30S ribosomal protein S4 id=3013123 bin=GWC1_OD1_38_17 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S4
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_4589_7
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

4549..5463
DNA (915bp) protein (305aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=5803408 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT19415.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
07M_4_2014_scaffold_4589_8

Not on your lists


5465..5815
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D107D
50S ribosomal protein L17 {ECO:0000313|EMBL:KKR46787.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
rplQ; ribosomal protein L17
07M_4_2014_scaffold_4589_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


5820..6161
DNA (342bp) protein (114aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplM; 50S ribosomal protein L13
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_4589_10
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


6169..6585
DNA (417bp) protein (139aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_4589_11
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

6803..7882
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4EWM7_BRARP
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
07M_4_2014_scaffold_4589_12
unknown

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8079..8624
DNA (546bp) protein (182aa)

This feature has no annotations

07M_4_2014_scaffold_4589_13
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

8782..9069
DNA (288bp) protein (96aa)
GrpE protein; K03687 molecular chaperone GrpE id=5803413 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
07M_4_2014_scaffold_4589_14
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

9154..11022
DNA (1869bp) protein (623aa)
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
molecular chaperone DnaK
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_4589_15
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

11037..12113
DNA (1077bp) protein (359aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:KKT20669.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
molecular chaperone DnaJ
07M_4_2014_scaffold_4589_16

Not on your lists

12121..12618
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT00785.1}; TaxID=1618827 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
transmembrane_regions 143..160 id=56778 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
07M_4_2014_scaffold_4589_17
unknown

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12615..12851
DNA (237bp) protein (79aa)

This feature has no annotations

07M_4_2014_scaffold_4589_18
unknown

Not on your lists

12928..12999
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 18 items

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