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07M_4_2014_scaffold_1442

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1442_1
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

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1..750
DNA (750bp) protein (250aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1PCM7_9FLAO
restriction modification system DNA specificity domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
07M_4_2014_scaffold_1442_2
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

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824..2434
DNA (1611bp) protein (537aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3Q0_DESAT
UDP-N-acetylmuramate/alanine ligase
Tax=GWF2_Planctomycetes_40_8_curated
07M_4_2014_scaffold_1442_3
unknown

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comp(2456..2635)
DNA (180bp) protein (60aa)

This feature has no annotations

07M_4_2014_scaffold_1442_4
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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2807..4552
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FGV3_9BACT
multidrug ABC transporter ATPase/permease
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
07M_4_2014_scaffold_1442_5
unknown

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comp(4743..4883)
DNA (141bp) protein (47aa)

This feature has no annotations

07M_4_2014_scaffold_1442_6
GWF2_OD1_36_839, Moranbacteria, Parcubacteria, Bacteria

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4996..6084
DNA (1089bp) protein (363aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000313|EMBL:KKQ16532.1}; TaxID=1618723 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_36_839.;"
UDP-N-acetylenolpyruvoylglucosamine reductase id=3737047 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
07M_4_2014_scaffold_1442_7
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

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6231..6680
DNA (450bp) protein (150aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=uncultured bacterium RepID=K1Z1S5_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
07M_4_2014_scaffold_1442_8

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6932..7288
DNA (357bp) protein (119aa)
Marine sediment metagenome DNA, contig: S03H2_C02680 {ECO:0000313|EMBL:GAH30426.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein id=86202 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
07M_4_2014_scaffold_1442_9
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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7293..8384
DNA (1092bp) protein (364aa)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=uncultured bacterium RepID=K2FEH5_9BACT
mnmA; tRNA-specific 2-thiouridylase MnmA
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
07M_4_2014_scaffold_1442_10
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

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8477..10486
DNA (2010bp) protein (670aa)
Putative uncharacterized protein id=4152250 bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
07M_4_2014_scaffold_1442_11
unknown

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10752..10883
DNA (132bp) protein (44aa)

This feature has no annotations

07M_4_2014_scaffold_1442_12
unknown

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10975..11262
DNA (288bp) protein (96aa)

This feature has no annotations

07M_4_2014_scaffold_1442_13
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

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11276..13165
DNA (1890bp) protein (630aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4A9_9FIRM
Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
Displaying 13 items

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