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07M_4_2014_scaffold_1993

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1993_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

1..2982
DNA (2982bp) protein (994aa)
hor:Hore_01100 DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=3257 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
07M_4_2014_scaffold_1993_2
unknown

Not on your lists

3207..3596
DNA (390bp) protein (130aa)

This feature has no annotations

07M_4_2014_scaffold_1993_3
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

3779..6070
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DZM8_9BACT
cell division protein FtsK
Tax=RBG_13_RIF_OD1_08_41_18_curated
07M_4_2014_scaffold_1993_4
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

6195..6899
DNA (705bp) protein (235aa)
XRE family transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2GBW9_9BACT
XRE family transcriptional regulator
Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
07M_4_2014_scaffold_1993_5
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists


7162..8199
DNA (1038bp) protein (346aa)
Protein RecA id=4790085 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
recA protein
Tax=CG_CPR04_01
07M_4_2014_scaffold_1993_6
GWC1_OD1_38_17, Parcubacteria, Bacteria

Not on your lists

comp(8253..8885)
DNA (633bp) protein (211aa)
Single-stranded DNA-binding protein id=3013257 bin=GWC1_OD1_38_17 species=Eikenella corrodens genus=Eikenella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKQ59136.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
hypothetical protein
07M_4_2014_scaffold_1993_7
unknown

Not on your lists

comp(8916..9521)
DNA (606bp) protein (202aa)

This feature has no annotations

07M_4_2014_scaffold_1993_8
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

comp(9668..10462)
DNA (795bp) protein (265aa)
translation-associated GTPase id=3013268 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
GTP-binding protein YchF
Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
07M_4_2014_scaffold_1993_9
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10802..11131)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GCW9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1993_10
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11354..11902
DNA (549bp) protein (183aa)
Phosphomannomutase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF25_9BACT
glmM; phosphomannomutase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_1993_11
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11913..12518
DNA (606bp) protein (202aa)
Fis family transcriptional regulator (EC:5.4.2.8)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CP45_9BACT
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_1993_12
unknown

Not on your lists

12698..12904
DNA (207bp) protein (69aa)

This feature has no annotations

07M_4_2014_scaffold_1993_13
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12935..13951)
DNA (1017bp) protein (339aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=4790119 bin=GWC2_OD1_43_27 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
07M_4_2014_scaffold_1993_14
unknown

Not on your lists

comp(14023..14274)
DNA (252bp) protein (84aa)

This feature has no annotations

07M_4_2014_scaffold_1993_15
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(15524..16105)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW15590.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
transmembrane_regions 30..52 id=52874 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
07M_4_2014_scaffold_1993_16
CG_CPR05_02, CG_CPR05, Bacteria

Not on your lists

comp(16652..18448)
DNA (1797bp) protein (599aa)
RNA-metabolising metallo-beta-lactamase id=3013277 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNA-metabolising metallo-beta-lactamase
Tax=CG_CPR05_02
07M_4_2014_scaffold_1993_trna_1
unknown

Not on your lists

comp(18532..18615)
DNA (84bp)
transferRNA Leu
07M_4_2014_scaffold_1993_17
GWA2_OD1_45_90, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(18672..20453)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F0I1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU19167.1}; TaxID=1618614 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_45_90.;"
putative ABC transporter substrate binding protein
07M_4_2014_scaffold_1993_18
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

Not on your lists

21362..24157
DNA (2796bp) protein (932aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU48366.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
ppd:Ppro_3567 hypothetical protein; K09118 hypothetical protein id=72698 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
07M_4_2014_scaffold_1993_19
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

24328..25809
DNA (1482bp) protein (494aa)
alpha-2-macroglobulin domain-containing protein; K06894 id=5093957 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
alpha-2-macroglobulin domain-containing protein
Tax=CG_CPR10_02
07M_4_2014_scaffold_1993_20
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

25781..30634
DNA (4854bp) protein (1618aa)
alpha-2-macroglobulin domain-containing protein; K06894 id=5093957 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=CG_CPR03_03
07M_4_2014_scaffold_1993_21
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

30635..30940
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CWL1_9BACT
hypothetical protein
Tax=CG_CPR10_03
07M_4_2014_scaffold_1993_22
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(31040..33112)
DNA (2073bp) protein (691aa)
pbpB; penicillin-binding protein 2; K05367 penicillin-binding protein 1C [EC:2.4.1.-] id=5095212 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
membrane carboxypeptidase
Tax=CG_CPR10_02
07M_4_2014_scaffold_1993_23
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

33471..36380
DNA (2910bp) protein (970aa)
UvrABC system protein A id=2921883 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
uvrA; excinuclease ABC subunit A
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
07M_4_2014_scaffold_1993_24
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

36799..37293
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036AE440
hypothetical protein
Tax=CG_CPR01_01
Displaying 25 items

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