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07M_4_2014_scaffold_3838

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_3838_1

Not on your lists

125..403
DNA (279bp) protein (93aa)
RelB_DinJ: addiction module antitoxin, RelB id=87068 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56617.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
07M_4_2014_scaffold_3838_2

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413..670
DNA (258bp) protein (86aa)
RelE-like id=87065 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56618.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
07M_4_2014_scaffold_3838_3
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

803..1021
DNA (219bp) protein (73aa)
Uncharacterized protein id=2110530 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
07M_4_2014_scaffold_3838_4
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists


comp(1307..1585)
DNA (279bp) protein (93aa)
50S ribosomal protein L31 id=4968612 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
LSU ribosomal protein L31P
Tax=GWA2_Elusimicrobia_69_24_curated
07M_4_2014_scaffold_3838_5
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists


1877..2548
DNA (672bp) protein (224aa)
30S ribosomal protein S2 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003611E1D
rpsB; 30S ribosomal protein S2
Tax=BJP_IG2158_OD1_28_51
07M_4_2014_scaffold_3838_6
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

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2689..3327
DNA (639bp) protein (213aa)
Elongation factor Ts n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NIX9_DESTT
tsf; elongation factor Ts (EF-Ts) Tsf
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
07M_4_2014_scaffold_3838_7

Not on your lists

3357..4172
DNA (816bp) protein (272aa)
PSP1 domain protein id=96587 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
PSP1 protein {ECO:0000313|EMBL:EKD49777.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Tpl protein
07M_4_2014_scaffold_3838_8
unknown

Not on your lists

4181..4906
DNA (726bp) protein (242aa)

This feature has no annotations

07M_4_2014_scaffold_3838_9
unknown

Not on your lists

comp(4996..5187)
DNA (192bp) protein (64aa)

This feature has no annotations

07M_4_2014_scaffold_3838_trna_1
unknown

Not on your lists

5026..5097
DNA (72bp)
transferRNA Thr
07M_4_2014_scaffold_3838_trna_2
unknown

Not on your lists

5231..5314
DNA (84bp)
transferRNA Tyr
07M_4_2014_scaffold_3838_trna_3
unknown

Not on your lists

5424..5496
DNA (73bp)
transferRNA Thr
07M_4_2014_scaffold_3838_10

Not on your lists

5803..6342
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003631E68
Uncharacterized protein {ECO:0000313|EMBL:KKR03487.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
07M_4_2014_scaffold_3838_trna_4
unknown

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6830..6900
DNA (71bp)
transferRNA Trp
07M_4_2014_scaffold_3838_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

6963..7682
DNA (720bp) protein (240aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific id=3013072 bin=GWC1_OD1_38_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
UDP pyrophosphate synthase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
07M_4_2014_scaffold_3838_12
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

7824..8450
DNA (627bp) protein (209aa)
L-isoaspartyl protein carboxyl methyltransferase (EC:2.1.1.77)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037526DA
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_3838_13
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists

8797..9543
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G955_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
07M_4_2014_scaffold_3838_14
unknown

Not on your lists

9558..9692
DNA (135bp) protein (45aa)

This feature has no annotations

07M_4_2014_scaffold_3838_15
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

9834..10049
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037925E1
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
07M_4_2014_scaffold_3838_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

10051..10593
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=uncultured bacterium RepID=K1ZI27_9BACT
antitermination protein NusG
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
07M_4_2014_scaffold_3838_17
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

Not on your lists


10726..11157
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036ECFAA
50S ribosomal protein L11 {ECO:0000313|EMBL:KKU48376.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
50S ribosomal protein L11
07M_4_2014_scaffold_3838_18
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


11290..11889
DNA (600bp) protein (200aa)
50S ribosomal protein L1 id=3479532 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ribosomal protein L1
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
07M_4_2014_scaffold_3838_19
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

11898..12305
DNA (408bp) protein (136aa)
transmembrane_regions 7..24 id=67279 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=CG_CPR03_03
07M_4_2014_scaffold_3838_20
GWA2_OP11_nov_40_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

12337..13002
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR75997.1}; TaxID=1618459 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_40_8.;"
hypothetical protein id=5085410 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
07M_4_2014_scaffold_3838_21
unknown

Not on your lists

12963..13388
DNA (426bp) protein (142aa)

This feature has no annotations

07M_4_2014_scaffold_3838_22
unknown

Not on your lists

13352..13807
DNA (456bp) protein (152aa)

This feature has no annotations

07M_4_2014_scaffold_3838_23
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

13827..14042
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKW48003.1}; TaxID=1618804 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
hypothetical protein
07M_4_2014_scaffold_3838_24
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

14197..14529
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003600678
PaaX family transcriptional regulator
Tax=CG_CPR10_03
07M_4_2014_scaffold_3838_25
unknown

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14672..14800
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 29 items

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