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07M_4_2014_scaffold_4009

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_4009_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

07M_4_2014_scaffold_4009_2

Not on your lists

comp(293..1951)
DNA (1659bp) protein (553aa)
DNA polymerase III subunits gamma/tau (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F068_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE11309.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
07M_4_2014_scaffold_4009_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1948..2367)
DNA (420bp) protein (140aa)
Membrane protein, GtrA superfamily id=3012784 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
07M_4_2014_scaffold_4009_4
unknown

Not on your lists

comp(2693..2995)
DNA (303bp) protein (101aa)

This feature has no annotations

07M_4_2014_scaffold_4009_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3150..4091
DNA (942bp) protein (314aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDW1_9EURY
Cytochrome c biogenesis protein {ECO:0000313|EMBL:KCZ73080.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytochrome c biogenesis protein transmembrane region
07M_4_2014_scaffold_4009_6
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

comp(4133..5194)
DNA (1062bp) protein (354aa)
glycosyl transferase, family 4, conserved region; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] id=2856 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
glycosyl transferase family protein
Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
07M_4_2014_scaffold_4009_7

Not on your lists

comp(5219..6718)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A7Q4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ57593.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
conserved membrane protein of unknown function
07M_4_2014_scaffold_4009_8
GWA1_OD1_37_20_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6763..7947)
DNA (1185bp) protein (395aa)
RmuC-domain protein {ECO:0000313|EMBL:KKQ32029.1}; TaxID=1618729 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_37_20.;"
Putative uncharacterized protein id=3914551 bin=GWF2_CPR3_35_18 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_CPR3_35_18 organism_group=CPR3 rbh
hypothetical protein
07M_4_2014_scaffold_4009_9
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7957..8274)
DNA (318bp) protein (106aa)
Asparaginase/glutaminase n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X0B0_DESRD
asparaginase/glutaminase
Asparaginase/glutaminase {ECO:0000313|EMBL:ACV67735.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
07M_4_2014_scaffold_4009_10

Not on your lists

comp(8757..9224)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS58015.1}; TaxID=1618823 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
TrpR like protein, YerC/YecD id=120141 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
07M_4_2014_scaffold_4009_11
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(9359..10315)
DNA (957bp) protein (319aa)
Putative uncharacterized protein id=2648835 bin=GWC1_OD1_38_17 species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
07M_4_2014_scaffold_4009_12
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10450..10872)
DNA (423bp) protein (141aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] id=5227029 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
atpC; ATP synthase (subunit epsilon, F1 subunit) (EC:3.6.3.14)
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
07M_4_2014_scaffold_4009_13
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11022..12173)
DNA (1152bp) protein (384aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
hypothetical protein id=5801231 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
Displaying 13 items

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