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07M_4_2014_scaffold_6350

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_6350_1
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(2..784)
DNA (783bp) protein (261aa)
Pyruvate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SNL6_9BACT
Pyruvate ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:BAL57752.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
pyruvate:ferredoxin oxidoreductase beta subunit
07M_4_2014_scaffold_6350_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1256..1639)
DNA (384bp) protein (128aa)
UPF0102 protein ANT_20920 id=3736371 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
conserved hypothetical protein TIGR00252
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
07M_4_2014_scaffold_6350_3

Not on your lists

comp(1974..4004)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F0M0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE11514.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
07M_4_2014_scaffold_6350_4
unknown

Not on your lists

comp(4044..4214)
DNA (171bp) protein (57aa)

This feature has no annotations

07M_4_2014_scaffold_6350_trna_5
unknown

Not on your lists

comp(4067..4139)
DNA (73bp)
transferRNA Gly
07M_4_2014_scaffold_6350_5
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(4157..4423)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000370E9BC
Uncharacterized protein {ECO:0000313|EMBL:KKR71760.1}; TaxID=1618482 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
excinuclease ABC subunit C domain-containing protein
07M_4_2014_scaffold_6350_trna_4
unknown

Not on your lists

comp(4483..4555)
DNA (73bp)
transferRNA Phe
07M_4_2014_scaffold_6350_trna_3
unknown

Not on your lists

comp(4648..4719)
DNA (72bp)
transferRNA Val
07M_4_2014_scaffold_6350_trna_2
unknown

Not on your lists

comp(4806..4889)
DNA (84bp)
transferRNA Leu
07M_4_2014_scaffold_6350_6

Not on your lists

comp(5591..6571)
DNA (981bp) protein (327aa)
Pseudouridine synthase id=2823905 bin=GWC1_OD1_38_17 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Pseudouridine synthase {ECO:0000313|EMBL:KKP98872.1}; TaxID=1618919 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_36_17.;"
ribosomal large subunit pseudouridine synthase D
07M_4_2014_scaffold_6350_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6635..6856)
DNA (222bp) protein (74aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
07M_4_2014_scaffold_6350_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6895..7083)
DNA (189bp) protein (63aa)
MutT/nudix family protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S62_SYMTH
mutT/nudix family protein
Tax=RBG_13_Pacearchaeota_36_9_curated
07M_4_2014_scaffold_6350_trna_1
unknown

Not on your lists

comp(7108..7181)
DNA (74bp)
transferRNA Ile
07M_4_2014_scaffold_6350_9
unknown

Not on your lists

comp(7240..7680)
DNA (441bp) protein (147aa)

This feature has no annotations

07M_4_2014_scaffold_6350_10
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7692..7901)
DNA (210bp) protein (70aa)
Transcriptional regulator, XRE family id=3506444 bin=GWC1_OD1_38_17 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
regulatory protein
Tax=CG_Falkow_04
07M_4_2014_scaffold_6350_11
GWB1_OD1_46_27, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(8008..8427)
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU34778.1}; TaxID=1618617 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_46_27.;"
07M_4_2014_scaffold_6350_12
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

8464..8670
DNA (207bp) protein (69aa)
transcriptional regulator, XRE family id=4712 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
regulatory protein
Tax=CG_CPR16-01
07M_4_2014_scaffold_6350_13
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

comp(8703..9395)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Eikenella corrodens CC92I RepID=V7IEM8_EIKCO
hypothetical protein
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
07M_4_2014_scaffold_6350_14
unknown

Not on your lists

comp(9413..10006)
DNA (594bp) protein (198aa)

This feature has no annotations

07M_4_2014_scaffold_6350_15
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10121..10822
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YCK6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
07M_4_2014_scaffold_6350_16
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

10831..11406
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XRH8_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
07M_4_2014_scaffold_6350_17
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11564..12412)
DNA (849bp) protein (283aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMT2_ARCVS
transposase IS116/IS110/IS902 family protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
07M_4_2014_scaffold_6350_18
RIFOXYC2_FULL_RIF_OD1_03_42_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

12491..13267
DNA (777bp) protein (259aa)
recombinase id=5098182 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
recombinase
Tax=RIFOXYC2_FULL_RIF_OD1_03_42_11_curated
07M_4_2014_scaffold_6350_19
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

13264..13953
DNA (690bp) protein (230aa)
Recombinase id=3506445 bin=GWC1_OD1_38_17 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
Displaying 24 items

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