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07M_4_2014_scaffold_10689

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_10689_1

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comp(317..610)
DNA (294bp) protein (98aa)
DUF721 id=96463 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD49397.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
07M_4_2014_scaffold_10689_2
CG_CPR04_01, CG_CPR04, Bacteria

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comp(740..1585)
DNA (846bp) protein (282aa)
DNA polymerase III subunit beta id=1968320 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA polymerase III subunit beta
Tax=CG_CPR04_01
07M_4_2014_scaffold_10689_3
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

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comp(1888..3387)
DNA (1500bp) protein (500aa)
Chromosomal replication initiator protein DnaA id=1968323 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) rbh
chromosomal replication initiator protein DnaA
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
07M_4_2014_scaffold_10689_4

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4548..5414
DNA (867bp) protein (289aa)
Sporulation associated-membrane protein {ECO:0000313|EMBL:KKS26133.1}; TaxID=1618819 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_11.;"
Stage III sporulation protein J id=1826478 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
sporulation associated-membrane protein
07M_4_2014_scaffold_10689_5
GWC2_OD1_41_9, Yanofskybacteria, Parcubacteria, Bacteria

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5429..5935
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FLK3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS27664.1}; TaxID=1619029 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_41_9.;"
single-stranded nucleic acid binding R3H domain-containing protein
07M_4_2014_scaffold_10689_6
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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6103..7542
DNA (1440bp) protein (480aa)
hypothetical lipopolysaccharide O-side chain biosynthesis protein id=136535 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
heteropolysaccharide repeat-containing protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
07M_4_2014_scaffold_10689_7
RifOxyA12_full_OD1_Moranbacteria_44_15_curated, Moranbacteria, Parcubacteria, Bacteria

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7793..8962
DNA (1170bp) protein (390aa)
O-antigen polymerase n=1 Tax=uncultured bacterium RepID=K2DZX6_9BACT
Tax=RifOxyA12_full_OD1_Moranbacteria_44_15_curated
07M_4_2014_scaffold_10689_8
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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9524..10630
DNA (1107bp) protein (369aa)
bicarbonate transporter, ICT family protein id=84404 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
07M_4_2014_scaffold_10689_9
unknown

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comp(10622..11254)
DNA (633bp) protein (211aa)

This feature has no annotations

07M_4_2014_scaffold_10689_10
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(11537..11956)
DNA (420bp) protein (140aa)
hypothetical protein id=5801461 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
07M_4_2014_scaffold_10689_11
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(12131..12556)
DNA (426bp) protein (142aa)
ribonuclease H id=16787 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
ribonuclease HI
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
07M_4_2014_scaffold_10689_12
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(12655..13782)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000382080D
single-stranded-DNA-specific exonuclease RecJ
Tax=RBG_13_RIF_OD1_08_37_53_curated
07M_4_2014_scaffold_10689_13
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(13788..14234)
DNA (447bp) protein (149aa)
hau:Haur_4833 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=3345201 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
single-stranded-DNA-specific exonuclease RecJ
Tax=CG_CPR01_01
07M_4_2014_scaffold_10689_14

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comp(14529..14771)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division JS1 bacterium RepID=G3BMP1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADM95006.1}; TaxID=292451 species="Bacteria; candidate division JS1; environmental samples.;" source="uncultured candidate division JS1 bacterium.;"
PorB subunit of pyruvate:flavodoxin oxidoreductase
Displaying 14 items

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