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07M_4_2014_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_65_1
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)
DNA methyltransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B51AA5
N-6 DNA methylase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_2
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(297..1340)
DNA (1044bp) protein (348aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=2 Tax=Thermoanaerobacter RepID=I8R619_9THEO
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_3
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1333..2175)
DNA (843bp) protein (281aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase id=4059016 bin=GWF2_Planctomycete_41_51 species=Pseudomonas sp. HPB0071 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_4
unknown

Not on your lists

comp(2141..2389)
DNA (249bp) protein (83aa)

This feature has no annotations

07M_4_2014_scaffold_65_5
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2334..3023)
DNA (690bp) protein (230aa)
Putative uncharacterized protein id=2091685 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_6
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists


comp(3030..4682)
DNA (1653bp) protein (551aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=3144327 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_7
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4815..5219)
DNA (405bp) protein (135aa)
Ribosomal silencing factor RsfS n=2 Tax=Clostridium thermocellum RepID=D1NMS3_CLOTM
iojap family protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_8
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5204..6376)
DNA (1173bp) protein (391aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXS0_HALOH
cell envelope-related transcriptional attenuator
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6533..7069)
DNA (537bp) protein (179aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q892P0_CLOTE
metal dependent phosphohydrolase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_10
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7053..7715)
DNA (663bp) protein (221aa)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium tetani 12124569 RepID=U6F1E3_CLOTA
nadD; nicotinic acid mononucleotideadenylyltransferase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_11
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7857..9122)
DNA (1266bp) protein (422aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 PF9_THEYO">RepID=U5CPF9_THEYO
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_12
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9189..9392)
DNA (204bp) protein (68aa)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_13
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9495..10190)
DNA (696bp) protein (232aa)
Thiol:disulfide interchange protein id=4425055 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
thiol:disulfide interchange protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_14
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10201..10878)
DNA (678bp) protein (226aa)
endonuclease III (EC:4.2.99.18)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=5240571 bin=GW2011_AR10_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_trna_1
unknown

Not on your lists

comp(10940..11013)
DNA (74bp)
transferRNA Met
07M_4_2014_scaffold_65_15
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11754..13484)
DNA (1731bp) protein (577aa)
RNA polymerase sigma factor id=4489131 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RpoD subfamily RNA polymerase sigma-70 subunit rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_16
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13557..15281)
DNA (1725bp) protein (575aa)
DNA primase id=4568860 bin=GWF2_OP3_38_59 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
DNA primase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_17
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15311..16282)
DNA (972bp) protein (324aa)
Putative uncharacterized protein id=3240382 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_18
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16427..16618)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=RS21_UNCTG
30S ribosomal protein S21
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_19
unknown

Not on your lists

comp(16620..16715)
DNA (96bp) protein (32aa)

This feature has no annotations

07M_4_2014_scaffold_65_20
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16712..17068)
DNA (357bp) protein (119aa)
Histidine triad (HIT) protein id=3362393 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Uncharacterized HIT-like protein aq_141
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_21
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17102..18856)
DNA (1755bp) protein (585aa)
Putative sulfatase (Transmembrane protein) id=2741243 bin=GWA2_Elusimicrobia_51_34 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia rbh
putative sulfatase (transmembrane protein) rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_22
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18973..20238)
DNA (1266bp) protein (422aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Clostridium sp. CAG:762 RepID=R5TJY0_9CLOT
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_23
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20386..20691)
DNA (306bp) protein (102aa)
Uncharacterized protein id=4788889 bin=GWC2_Elusimicrobia_64_44 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_24
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20839..21783)
DNA (945bp) protein (315aa)
transketolase; K00615 transketolase [EC:2.2.1.1] id=7200646 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
transketolase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_25
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21914..22726)
DNA (813bp) protein (271aa)
Transketolase domain-containing protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V713_THELD rbh
transketolase rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_65_26
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22786..23640)
DNA (855bp) protein (285aa)
Dihydroorotate dehydrogenase id=4425046 bin=GWC2_OP3_44_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
PyrD; dihydroorotate dehydrogenase 1B
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_65_27
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(23730..25310)
DNA (1581bp) protein (527aa)
N-6 DNA Methylase family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKH7_9BACT rbh
N-6 DNA methylase
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
07M_4_2014_scaffold_65_28
CG_Falkow_02, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25292..25972)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B48B9D
hypothetical protein
Tax=CG_Falkow_02
07M_4_2014_scaffold_65_29
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(26020..26949)
DNA (930bp) protein (310aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit id=4202415 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
oxidoreductase FAD/NAD(P)-binding subunit
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Displaying items 1-30 of 83 in total

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