ggKbase home page

07M_4_2014_scaffold_395

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_395_1
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

3..254
DNA (252bp) protein (84aa)
Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TM09_THETC
RnfABCDGE type electron transport complex subunit E
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
07M_4_2014_scaffold_395_2
Flexistipes sinusarabici, Flexistipes, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

386..961
DNA (576bp) protein (192aa)
Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E898_FLESM
RnfABCDGE type electron transport complex subunit A
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=717231 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Flexistipes.;" source="Flexistipes sinusarabici (strain DSM 4947 / MAS 10).;"
07M_4_2014_scaffold_395_3
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

1088..1876
DNA (789bp) protein (263aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TFM9_CALNY
electron transport complex, rnfABCdge type, b subunit
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:ADR18497.1}; Flags: Precursor;; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 /; Yu37-1).;"
07M_4_2014_scaffold_395_4
unknown

Not on your lists

1998..2261
DNA (264bp) protein (88aa)
07M_4_2014_scaffold_395_5
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

2496..3323
DNA (828bp) protein (276aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0G5_UNCTG
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_395_6
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

3320..3721
DNA (402bp) protein (134aa)
Putative uncharacterized protein id=4321154 bin=GWC2_OP3_44_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
antitermination regulatory protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_395_7
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

3666..4019
DNA (354bp) protein (118aa)
Sensor diguanylate cyclase, GAF domain-containing id=3159243 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
07M_4_2014_scaffold_395_8
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

4046..4387
DNA (342bp) protein (114aa)
Cupin 2 domain-containing protein id=4982212 bin=GWA2_Elusimicrobia_66_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cupin
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_9
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

4468..6096
DNA (1629bp) protein (543aa)
phosphomannomutase (EC:5.4.2.8) rbh
Phosphomannomutase id=4870539 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_10
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

6199..7401
DNA (1203bp) protein (401aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase id=4894083 bin=GWA2_Elusi-like_A8_64_40 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_11
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

7608..8912
DNA (1305bp) protein (435aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLY2_9BACT
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_12
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

9095..10666
DNA (1572bp) protein (524aa)
Putative uncharacterized protein id=4397841 bin=GWA2_Elusimicrobia_56_46 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_13
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

10880..12856
DNA (1977bp) protein (659aa)
m6 family metalloprotease domain protein id=2769236 bin=GWC2_Nitrospirae-rel_56_14 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
protease
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_395_14
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

12841..13887
DNA (1047bp) protein (349aa)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_15
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13941..15026)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036A1996
permease YjgP/YjgQ family protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_16
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15134..16219)
DNA (1086bp) protein (362aa)
Permease id=2088340 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
permease YjgP/YjgQ family protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_17
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

16486..21735
DNA (5250bp) protein (1750aa)
Putative uncharacterized protein id=1917810 bin=GWA2_Elusimicrobia_51_34 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia rbh
hypothetical protein rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_395_18
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21783..22241)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=4540343 bin=GWA2_Ignavibacteria-rel_35_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Desulfob_01
07M_4_2014_scaffold_395_19
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22238..22507)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5J1_9BACT
hypothetical protein
Tax=CG_Desulfob_01
07M_4_2014_scaffold_395_20
GWC2_OP11_47_9_partial, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

23152..23454
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86603.1}; TaxID=1618373 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWC2_47_9.;"
Putative uncharacterized protein id=3772501 bin=GWC2_Planctomycete_KSU_39_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
07M_4_2014_scaffold_395_21
GWA1_OP11_39_12_plus, Woesebacteria, Microgenomates, Bacteria

Not on your lists

23438..23707
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D1W0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ98247.1}; TaxID=1618549 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_39_12.;"
hypothetical protein
07M_4_2014_scaffold_395_22
unknown

Not on your lists

comp(23729..28156)
DNA (4428bp) protein (1476aa)

This feature has no annotations

Displaying 22 items

View Taxonomy