ggKbase home page

07M_4_2014_scaffold_623

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_623_1
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..748)
DNA (747bp) protein (249aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
type II restriction endonuclease HinfI n=1 Tax=Brachyspira innocens RepID=UPI0003813D14
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
07M_4_2014_scaffold_623_2
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(753..1661)
DNA (909bp) protein (303aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J4W9_9FUSO
adenine-specific DNA methyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
07M_4_2014_scaffold_623_3
unknown

Not on your lists

comp(1658..1927)
DNA (270bp) protein (90aa)
07M_4_2014_scaffold_623_4
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(1932..2843)
DNA (912bp) protein (304aa)
hypothetical protein n=2 Tax=Bacteria RepID=UPI0003A34AEF
hypothetical protein
Tax=CG_Micra_01
07M_4_2014_scaffold_623_5
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(2970..3956)
DNA (987bp) protein (329aa)
putative N-4 cytosine-specific methyltransferase (EC:2.1.1.113) rbh
modification methylase n=2 Tax=Bacteria RepID=UPI00039CD619 rbh
Tax=RBG_16_Zixibacteria_43_9_curated
07M_4_2014_scaffold_623_6
Microgenomates bacterium GW2011_GWC1_38_12, Microgenomates, Bacteria

Not on your lists

comp(4012..4869)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036DEA67
Methylase N-4/N-6 protein {ECO:0000313|EMBL:KKQ51019.1}; TaxID=1618512 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_38_12.;"
DNA methylase N-4/N-6 domain-containing protein
07M_4_2014_scaffold_623_7
unknown

Not on your lists

comp(4875..5984)
DNA (1110bp) protein (370aa)

This feature has no annotations

07M_4_2014_scaffold_623_8
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6031..7161)
DNA (1131bp) protein (377aa)
Threonine synthase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ35_UNCTG
threonine synthase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_623_9
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7291..8613)
DNA (1323bp) protein (441aa)
Homoserine dehydrogenase id=2188738 bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
homoserine dehydrogenase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_623_10
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8665..9846)
DNA (1182bp) protein (394aa)
Aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Methylophaga lonarensis MPL RepID=M7PNH1_9GAMM
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_623_11
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9915..10175)
DNA (261bp) protein (87aa)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_623_12
BJP_IG2157_CP_49_12, Bacteria

Not on your lists

comp(10233..11060)
DNA (828bp) protein (276aa)
Putative uncharacterized protein id=4276602 bin=GWC2_Ignavibacteria_38_9 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2157_CP_49_12
07M_4_2014_scaffold_623_13
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11245..12303)
DNA (1059bp) protein (353aa)
Ketol-acid reductoisomerase, mitochondrial n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG02_9DELT rbh
ketol-acid reductoisomerase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_623_14
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(12372..13181)
DNA (810bp) protein (270aa)
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T0K5_9EURY
Ribose 1,5-bisphosphate isomerase
Tax=CG_Elusi_05
07M_4_2014_scaffold_623_15
unknown

Not on your lists

13374..13541
DNA (168bp) protein (56aa)

This feature has no annotations

07M_4_2014_scaffold_623_16
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13704..13847)
DNA (144bp) protein (48aa)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_623_17
unknown

Not on your lists

comp(13925..14068)
DNA (144bp) protein (48aa)

This feature has no annotations

07M_4_2014_scaffold_623_18
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(14146..14559)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IF53_ACIB4
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
07M_4_2014_scaffold_623_19
unknown

Not on your lists

comp(14547..14756)
DNA (210bp) protein (70aa)

This feature has no annotations

07M_4_2014_scaffold_623_20
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14800..15963)
DNA (1164bp) protein (388aa)
Tyrosine--tRNA ligase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZW0_UNCTG rbh
tyrosyl-tRNA synthetase rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_623_21
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

16455..18635
DNA (2181bp) protein (727aa)
Penicillin-binding protein 1B n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0J0_UNCTG rbh
penicillin-binding protein 1B rbh
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_623_22
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

18736..19272
DNA (537bp) protein (179aa)
Conserved ferredoxin domain protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A440_NATTJ
ferredoxin
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
07M_4_2014_scaffold_623_23
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19287..20945)
DNA (1659bp) protein (553aa)
Tetratricopeptide TPR_1 repeat-containing protein id=4096589 bin=GWA2_Elusi-like_A8_64_40 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
07M_4_2014_scaffold_623_24
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21003..21824)
DNA (822bp) protein (274aa)
Fibronectin, type III domain protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ART0_PELPD
fibronectin type III domain-containing protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
Displaying 24 items

View Taxonomy