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07M_4_2014_scaffold_1974

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1974_1
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(3..398)
DNA (396bp) protein (132aa)
methionine aminopeptidase (EC:3.4.11.18)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FAEFA
Tax=CG_CPR10_02
07M_4_2014_scaffold_1974_2
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

comp(490..1200)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036C1906
adenylate kinase
Tax=CG_CPR03_03
07M_4_2014_scaffold_1974_3
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


comp(1187..2518)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FAA52
preprotein translocase subunit SecY
Tax=CG_CPR10_03
07M_4_2014_scaffold_1974_4

Not on your lists


comp(2551..3021)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003794552
Marine sediment metagenome DNA, contig: S06H3_L06530 {ECO:0000313|EMBL:GAI02795.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L15
07M_4_2014_scaffold_1974_5
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


comp(3087..3584)
DNA (498bp) protein (166aa)
30S ribosomal protein S5 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036AF467
30S ribosomal protein S5
Tax=CG_CPR10_03
07M_4_2014_scaffold_1974_6

Not on your lists


comp(3679..4107)
DNA (429bp) protein (143aa)
50S ribosomal protein L18, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F56E2
50S ribosomal protein L18 {ECO:0000313|EMBL:KKQ96729.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
50S ribosomal protein L18
07M_4_2014_scaffold_1974_7
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists


comp(4216..4758)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371A5D4
50S ribosomal protein L6
Tax=CG_CPR10_02
07M_4_2014_scaffold_1974_8
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


comp(4761..5147)
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037C1A94
30S ribosomal protein S8
Tax=RBG_13_RIF_OD1_07_36_15_curated
07M_4_2014_scaffold_1974_9
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists


comp(5542..6126)
DNA (585bp) protein (195aa)
50S ribosomal protein L5 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000375014D
rplE; 50S ribosomal protein L5
Tax=CG_CPR10_02
07M_4_2014_scaffold_1974_10
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


comp(6108..6413)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D7C7C
50S ribosomal protein L24
Tax=CG_CPR10_03
07M_4_2014_scaffold_1974_11
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


comp(6410..6763)
DNA (354bp) protein (118aa)
50S ribosomal protein L14 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037C9377
50S ribosomal protein L14
Tax=CG_CPR10_03
07M_4_2014_scaffold_1974_12
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(6853..7092)
DNA (240bp) protein (80aa)
30S ribosomal protein S17 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000376071E
30S ribosomal protein S17
Tax=CG_CPR10_01
07M_4_2014_scaffold_1974_13
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


comp(7074..7271)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000374EE7D
50S ribosomal protein L29
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
07M_4_2014_scaffold_1974_14
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


comp(7284..7694)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00038230D1
rplP; 50S ribosomal protein L16
Tax=RBG_13_RIF_OD1_07_36_15_curated
07M_4_2014_scaffold_1974_15
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(7778..8416)
DNA (639bp) protein (213aa)
30S ribosomal protein S3 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036A2190
30S ribosomal protein S3
Tax=CG_CPR10_01
07M_4_2014_scaffold_1974_16

Not on your lists


comp(8518..8877)
DNA (360bp) protein (120aa)
50S ribosomal protein L22 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003631AAB
Marine sediment metagenome DNA, contig: S01H4_L00540 {ECO:0000313|EMBL:GAG60822.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L22
07M_4_2014_scaffold_1974_17
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(8975..9298)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378D2A3
30S ribosomal protein S19
Tax=CG_CPR10_01
07M_4_2014_scaffold_1974_18
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(9305..10090)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000361B17E
50S ribosomal protein L2
Tax=CG_CPR10_01
07M_4_2014_scaffold_1974_19
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(10122..10484)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000376BEC7
50S ribosomal protein L23
Tax=CG_CPR10_01
07M_4_2014_scaffold_1974_20
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists


comp(10488..11066)
DNA (579bp) protein (193aa)
50S ribosomal protein L4 id=2824341 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L4P
Tax=CG_CPR03_03
07M_4_2014_scaffold_1974_21
unknown

Not on your lists

comp(11137..11355)
DNA (219bp) protein (73aa)

This feature has no annotations

07M_4_2014_scaffold_1974_22
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11352..11810)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=3927468 bin=GWA2_Ignavibacteria-rel_35_8 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Displaying 22 items

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