ggKbase home page

07M_4_2014_scaffold_6492

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_6492_1

Not on your lists

1..273
DNA (273bp) protein (91aa)
Glycosyl transferase group 1 n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L151_9EURY
Marine sediment metagenome DNA, contig: S12H4_S09745 {ECO:0000313|EMBL:GAI88999.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
group 1 glycosyl transferase
07M_4_2014_scaffold_6492_2
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

475..750
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000374AF65
Tax=CG_CPR10_01
07M_4_2014_scaffold_6492_3
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

822..2156
DNA (1335bp) protein (445aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365CDA4
Tax=CG_CPR10_01
07M_4_2014_scaffold_6492_4
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


2276..3451
DNA (1176bp) protein (392aa)
tra:Trad_2070 aspartyl-tRNA synthetase; K09759 nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] id=85054 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KKQ78634.1}; TaxID=1618418 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
aspC; aspartyl-tRNA synthetase
07M_4_2014_scaffold_6492_5
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

3455..4381
DNA (927bp) protein (309aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371AFF0 rbh
Tax=CG_CPR10_01
07M_4_2014_scaffold_6492_6
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

4383..5471
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D8FBE
hypothetical protein
Tax=CG_CPR10_01
07M_4_2014_scaffold_6492_7
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

5510..7006
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F78D5
putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=CG_CPR10_02
07M_4_2014_scaffold_6492_8
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

6993..8423
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035ED7B2
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase
Tax=CG_CPR10_02
07M_4_2014_scaffold_6492_9
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

8929..10053
DNA (1125bp) protein (375aa)
iron compound ABC transporter ATP-binding protein (EC:3.6.3.34)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003738498 rbh
Tax=CG_CPR10_03
07M_4_2014_scaffold_6492_10
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

10070..11449
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000373FFC6
glutamyl-tRNA synthetase
Tax=CG_CPR10_03
07M_4_2014_scaffold_6492_11
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

11434..11859
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003775E25
Tax=CG_CPR10_01
07M_4_2014_scaffold_6492_12
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

11972..12928
DNA (957bp) protein (319aa)
hypothetical protein id=5801201 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
xerD; tyrosine recombinase xerd
Tax=CG_CPR10_02
07M_4_2014_scaffold_6492_13
unknown

Not on your lists

comp(12929..13012)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 13 items

View Taxonomy