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08E140C01_z5_2013_Ig3399_v2_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 306 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_224_1
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90..1298)
DNA (1209bp) protein (403aa)
Stage II sporulation protein P n=1 Tax=Dorea sp. 5-2 RepID=R9NNY9_9FIRM
Stage II sporulation protein P (SpoIIP).
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_2
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1362..2345)
DNA (984bp) protein (328aa)
spore protease (EC:3.4.24.78); K06012 spore protease [EC:3.4.24.78] rbh
Germination protease n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRF1_9CLOT rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_3
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2534..2797
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=3 Tax=Clostridium RepID=E7GJ51_CLOSY
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_4
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2945..3937)
DNA (993bp) protein (331aa)
hypothetical protein; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHR8_9CLOT
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_5
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3925..6243)
DNA (2319bp) protein (773aa)
DNA internalization-related competence protein ComEC/Rec2 id=2132899 bin=GWD2_Clostridiales_32_19 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85 rbh
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6278..7198)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AGS5_9FIRM
Lipoprotein LpqB, GerMN domain-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7270..8676)
DNA (1407bp) protein (469aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQX4_CELLD rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8669..9364)
DNA (696bp) protein (232aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHN7_CLOPH rbh
two component transcriptional regulator rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_9
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9378..10028)
DNA (651bp) protein (217aa)
ComE operon protein 1 n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NE87_CLOSV
competence protein ComEA helix-hairpin-helix repeat region
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_10
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10052..10507)
DNA (456bp) protein (152aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZGQ3_9CLOT
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_11
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10718..12685
DNA (1968bp) protein (656aa)
nadE; glutamine-dependent NAD(+) synthetase NadE; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
Glutamine-dependent NAD(+) synthetase NadE n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHJ7_ACEWD
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_12
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12757..14514)
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037C6463 rbh
diguanylate cyclase domain-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_13
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14658..15497)
DNA (840bp) protein (280aa)
DegV family protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFW1_ALKOO
degV family protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_14
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15539..15961)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=1854971 bin=GWE2_Bacteroidetes_42_39 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
amino acid-binding ACT domain-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_15
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15973..17271)
DNA (1299bp) protein (433aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] rbh
Phenylacetate--CoA ligase n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6USL0_METVS rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17310..17771)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W830_9FIRM
amino acid-binding ACT domain-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_17
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17752..18327)
DNA (576bp) protein (192aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
Putative indolepyruvate ferredoxin oxidoreductase, beta subunit n=2 Tax=root RepID=A5Z5Q3_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_18
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18317..20065)
DNA (1749bp) protein (583aa)
thiamine pyrophosphate enzyme-like TPP-binding protein; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] rbh
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=2 Tax=Clostridium thermocellum RepID=A3DD19_CLOTH rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_19
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20096..21388)
DNA (1293bp) protein (431aa)
coenzyme F390 synthetase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] rbh
Coenzyme F390 synthetase n=1 Tax=Methanococcus maripaludis X1 RepID=G0H1P5_METMI rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_20
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21434..22654)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Bacillus marmarensis DSM 21297 RepID=U6SJL5_9BACI
multi-drug ABC transporter permease; K09686 antibiotic transport system permease protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_21
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22680..23906)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPI3_CLOPH
hypothetical protein; K09686 antibiotic transport system permease protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_22
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23903..25057)
DNA (1155bp) protein (385aa)
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_23
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25067..25930)
DNA (864bp) protein (288aa)
Conserved protein with patatin domain n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q897F8_CLOTE
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_24
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25952..27226)
DNA (1275bp) protein (425aa)
30S ribosomal protein S1 n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT rbh
rpsA; hypothetical protein; K02945 small subunit ribosomal protein S1 rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_25
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27421..27765
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QY87_9CLOT
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_26
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27930..28208
DNA (279bp) protein (93aa)
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_27
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28205..28519)
DNA (315bp) protein (105aa)
Rhodanese-related sulfurtransferase n=1 Tax=Anoxybacillus flavithermus (strain DSM 21510 / WK1) RepID=B7GJP3_ANOFW
Rhodanese-related sulfurtransferase
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28836..29261
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028952A2
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_29
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29292..30080)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWC3_HALOH
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_224_30
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30086..32179)
DNA (2094bp) protein (698aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EEM3_9FIRM
diguanylate cyclase
Tax=BJP_IG2102_Clostridiales_34_350
Displaying items 1-30 of 306 in total

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