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08E140C01_z5_2013_Ig3399_v2_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_529_trna_2
unknown

Not on your lists

comp(159..247)
DNA (89bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_529_trna_1
unknown

Not on your lists

comp(303..388)
DNA (86bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_529_1
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(464..1207)
DNA (744bp) protein (248aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PND9_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_2
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1557..2063
DNA (507bp) protein (169aa)
ferroxidase; K02217 ferritin [EC:1.16.3.1]
Ferroxidase id=1906858 bin=GWD2_Clostridiales_32_19 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_3
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2198..3220)
DNA (1023bp) protein (341aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57) rbh
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Clostridium sp. CAG:411 RepID=R7I5B3_9CLOT rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_4
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3247..3843)
DNA (597bp) protein (199aa)
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_5
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3888..4814)
DNA (927bp) protein (309aa)
RNAse Z (EC:3.1.26.11) rbh
Ribonuclease Z n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VJR7_9FIRM rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5059..5289)
DNA (231bp) protein (77aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BWC2_9FIRM
ribosomal-protein-alanine acetyltransferase
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5426..7717)
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00038006D1
peptidase S16, lon-like protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7924..8628)
DNA (705bp) protein (235aa)
Universal bacterial protein YeaZ n=2 Tax=Coprococcus RepID=C0B563_9FIRM
Inactive homolog of metal-dependent proteases, putative molecular chaperone
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_9
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8664..9089)
DNA (426bp) protein (142aa)
Conserved hypothetical nucleotide-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAX5_9CLOT
hypothetical protein; K06925 UPF0079 ATP-binding protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_10
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9206..11347)
DNA (2142bp) protein (714aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XTJ7_9FIRM rbh
Transcriptional accessory protein rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_11
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11521..12732)
DNA (1212bp) protein (404aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKT4_CELLD rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_12
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12762..13985)
DNA (1224bp) protein (408aa)
proposed homoserine kinase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] rbh
Proposed homoserine kinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKT3_CELLD rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_13
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13998..15233)
DNA (1236bp) protein (412aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
Homoserine dehydrogenase n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NM53_9FIRM rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_14
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15238..15681)
DNA (444bp) protein (148aa)
ACT domain-containing protein (EC:5.4.99.5)
UPF0735 ACT domain-containing protein CC1_16090 n=1 Tax=Coprococcus catus GD/7 RepID=D4J7Q3_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_15
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15896..16360)
DNA (465bp) protein (155aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWU3_9CLOT
chemotaxis protein, CheW-like protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16448..17491)
DNA (1044bp) protein (348aa)
Peptide chain release factor 2 n=3 Tax=Anaerostipes RepID=B0MH01_9FIRM rbh
peptide chain release factor 2; K02836 peptide chain release factor 2 rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_17
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17592..20162)
DNA (2571bp) protein (857aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. CAG:253 RepID=R6MV96_9CLOT rbh
protein translocase subunit secA rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_18
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20516..23005
DNA (2490bp) protein (830aa)
acyl-CoA synthetase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWJ0_CLOCD rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_19
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23116..24363)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6C714_9BACI rbh
hypothetical protein rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_20
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24469..24828)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMJ6_CLOPA
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_21
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24919..25497)
DNA (579bp) protein (193aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Clostridium sp. CAG:411 RepID=R7I9M6_9CLOT
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_22
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26384..28144)
DNA (1761bp) protein (587aa)
hydrogenase, Fe-only (EC:1.12.7.2); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] rbh
Hydrogenase, Fe-only n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSY0_CELLD rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_23
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28257..30050)
DNA (1794bp) protein (598aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
NADH dehydrogenase (Quinone) n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSY1_CELLD rbh
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_24
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30119..30517)
DNA (399bp) protein (133aa)
NADP-reducing hydrogenase subunit B n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSY2_CELLD
NADP-reducing hydrogenase subunit B
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_25
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30543..31022)
DNA (480bp) protein (160aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH dehydrogenase (Quinone) n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSY3_CELLD
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_26
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31132..31851)
DNA (720bp) protein (240aa)
Predicted metal-dependent phosphoesterase (PHP family) n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQ60_9CLOT
PHP domain-containing protein; K07053
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_27
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32078..33712
DNA (1635bp) protein (545aa)
Multi-sensor hybrid histidine kinase id=2767901 bin=GWC1_Spirochaetes_27_15 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
signal transduction histidine kinase
Tax=BJP_IG2102_Clostridiales_34_350
08E140C01_z5_2013_Ig3399_v2_scaffold_529_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33728..34108
DNA (381bp) protein (127aa)
Tax=BJP_IG2102_Clostridiales_34_350
Displaying items 1-30 of 68 in total

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