ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_2504

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_1
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(59..274)
DNA (216bp) protein (72aa)
id=2443689 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_2
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(378..1904)
DNA (1527bp) protein (509aa)
Conserved repeat protein id=3782362 bin=GWC2_TM7_48_9 species=Lachnospiraceae bacterium oral taxon 082 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
exported protein of unknown function rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2162..3376)
DNA (1215bp) protein (405aa)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_4
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3400..4350)
DNA (951bp) protein (317aa)
M protein repeat protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NP66_9CLOT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_trna_1
unknown

Not on your lists

4794..4865
DNA (72bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_5
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(4828..6546)
DNA (1719bp) protein (573aa)
NUDIX hydrolase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVK8_9BACT rbh
site-specific recombinase, DNA invertase Pin
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(6531..6686)
DNA (156bp) protein (52aa)
seg id=5226029 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

6847..7566
DNA (720bp) protein (240aa)
id=5226028 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(7600..7905)
DNA (306bp) protein (102aa)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_9
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8036..8293)
DNA (258bp) protein (86aa)
Putative uncharacterized protein id=5226027 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_10
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

8693..9589
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UEE9_RHOBA
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_11
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10250..10756)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) RepID=A7H2W2_CAMJD
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10753..11394)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Staphylococcus epidermidis RepID=UPI00030E7A7D
rlfA; hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_13
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11499..13331)
DNA (1833bp) protein (611aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T2V6_JANMA rbh
hypothetical protein rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_14
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

13625..16495
DNA (2871bp) protein (957aa)
Similar to helicase subunit of dna repair complex id=2632985 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_15
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

16503..18218
DNA (1716bp) protein (572aa)
DNA methyltransferase n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00035FAF94 rbh
DNA methylase N-4/N-6 rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_16
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

18215..20965
DNA (2751bp) protein (917aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJT1_9PLAN
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_17
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

20958..24068
DNA (3111bp) protein (1037aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YIQ8_9DELT rbh
ABC transporter rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_2504_18
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

24151..25644
DNA (1494bp) protein (498aa)
ATP-dependent DNA helicase, RecQ family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W4Y1_RHILT
RecQ familyATP-dependent DNA helicase
Tax=BJP_IG2103_TM7_39_1400
Displaying 19 items

View Taxonomy