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08E140C01_z5_2013_Ig3399_v2_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_397_1
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

237..1037
DNA (801bp) protein (267aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=4440623 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_2
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1168..1443)
DNA (276bp) protein (92aa)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1485..1928)
DNA (444bp) protein (148aa)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_4
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

2332..5673
DNA (3342bp) protein (1114aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) rbh
DNA-directed RNA polymerase beta subunit id=2441385 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_5
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

5675..9517
DNA (3843bp) protein (1281aa)
rpoC; RNA polymerase (beta' subunit) (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta' id=2441379 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


9805..10218
DNA (414bp) protein (138aa)
30S ribosomal protein S12 id=2441371 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsL; ribosomal protein S12 (BS12)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


10221..10700
DNA (480bp) protein (160aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=5226715 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
rpsG; ribosomal protein S7 (BS7)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

10719..11540
DNA (822bp) protein (274aa)
membrane protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI000381C24F
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_9
unknown

Not on your lists

comp(11845..12057)
DNA (213bp) protein (71aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_397_10
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

12429..14516
DNA (2088bp) protein (696aa)
Elongation factor G id=2441188 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
fusA; Elongation factor G rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_11
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

14592..15458
DNA (867bp) protein (289aa)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

15777..16583
DNA (807bp) protein (269aa)
HD domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1U6_9FIRM
HD domain.
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_13
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

16721..17527
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=root RepID=R6B535_9CLOT
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_14
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

17739..18920
DNA (1182bp) protein (394aa)
Elongation factor Tu id=4440500 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
tufA; elongation factor Tu rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_15
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

19199..19636
DNA (438bp) protein (146aa)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_16
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

19774..21009
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037AC12E
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_17
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


21323..21646
DNA (324bp) protein (108aa)
ribosomal protein S10, partial id=2441159 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsJ; ribosomal protein S10 (BS13)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_18
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21713..22042)
DNA (330bp) protein (110aa)
histone n=2 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B5B4ED
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_19
unknown

Not on your lists

22081..22173
DNA (93bp) protein (31aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_397_20
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(22132..22959)
DNA (828bp) protein (276aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin id=2441150 bin=GWC2_TM7_44_17 species=Cellulomonas flavigena genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_21
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

23444..23602
DNA (159bp) protein (53aa)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_22
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

23816..24406
DNA (591bp) protein (197aa)
TIR protein id=3642759 bin=GWF2_Bacteroidetes_41_31 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_23
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


24585..25199
DNA (615bp) protein (205aa)
50S ribosomal protein L3 id=4440494 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
rplC; ribosomal protein L3 (BL3) rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_24
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


25199..25816
DNA (618bp) protein (206aa)
50S ribosomal protein L4 id=2441130 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
rplD; 50S ribosomal protein L4
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_25
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


25818..26174
DNA (357bp) protein (119aa)
50S ribosomal protein L23 id=2441124 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplW; 50S ribosomal subunit protein L23
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_26
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


26174..27013
DNA (840bp) protein (280aa)
Ribosomal protein L2 id=2441119 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
rplB; ribosomal protein L2 (BL2) rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_27
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


27017..27283
DNA (267bp) protein (89aa)
Ribosomal protein S19 id=2441113 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsS; ribosomal protein S19 (BS19)
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_28
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


27283..27681
DNA (399bp) protein (133aa)
50S ribosomal protein L22 id=2441108 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplV; 50S ribosomal protein L22
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_29
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


27681..28313
DNA (633bp) protein (211aa)
30S ribosomal protein S3 id=2441104 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
rpsC; ribosomal protein S3 (BS3) rbh
Tax=BJP_IG2103_TM7_39_1400
08E140C01_z5_2013_Ig3399_v2_scaffold_397_30
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


28319..28732
DNA (414bp) protein (138aa)
50S ribosomal protein L16 id=2441102 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplP; ribosomal protein L16
Tax=BJP_IG2103_TM7_39_1400
Displaying items 1-30 of 87 in total

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