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08E140C01_z5_2013_Ig3399_v2_scaffold_1053

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..740)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCD2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF11684.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_2
uncultured delta proteobacterium HF0010_08B07, Deltaproteobacteria, Proteobacteria, Bacteria

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956..1777
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=uncultured delta proteobacterium HF0010_08B07 RepID=E0XWW8_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:ADI18909.1}; TaxID=710821 species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0010_08B07.;"
nuclease
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_3

Not on your lists

1805..2245
DNA (441bp) protein (147aa)
Exopolysaccharide biosynthesis protein, glycosyltransferase n=1 Tax=uncultured bacterium RepID=K1ZI76_9BACT
Exopolysaccharide biosynthesis protein, glycosyltransferase {ECO:0000313|EMBL:EKD55090.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glucosyltransferase EpsE-like protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_4
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2242..2820
DNA (579bp) protein (193aa)
glycosyl transferase family 28 n=1 Tax=Salinispora pacifica RepID=UPI0003736D1E
glycosyltransferase family 28 protein
Glycosyltransferase 28, C-terminal domain {ECO:0000313|EMBL:ABP54302.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_5
RLO_PLX_64_10, Bacteria

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comp(2896..5451)
DNA (2556bp) protein (852aa)
maltodextrin phosphorylase (EC:2.4.1.1) Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
carbohydrate phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-glucan phosphorylase id=3516232 bin=GWC2_Proteo_65_14_Ab886 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_6
unknown

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5607..6863
DNA (1257bp) protein (419aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1053_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6860..8509
DNA (1650bp) protein (550aa)
Peptide chain release factor 3 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PQ38_9DELT rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
peptide chain release factor 3; K02837 peptide chain release factor 3 rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_8
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(8522..10024)
DNA (1503bp) protein (501aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
multi-sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C447C
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_9
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10026..11234)
DNA (1209bp) protein (403aa)
Signal transduction histidine kinase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z937_9PROT
Signal transduction histidine kinase {ECO:0000313|EMBL:EME70880.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
signal transduction histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_10
unknown

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11434..11766
DNA (333bp) protein (111aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1053_11
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11829..12374
DNA (546bp) protein (182aa)
DTW domain containing protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5Y6_GEODF
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
DTW domain containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_12
Taphrina deformans, Taphrina, Taphrinales, Taphrinomycetes, Ascomycota, Fungi

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12678..13706
DNA (1029bp) protein (343aa)
choline/ethanolaminephosphotransferase (EC:2.7.8.1); K00993 ethanolaminephosphotransferase [EC:2.7.8.1]
Related to ethanolaminephosphotransferase n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) RepID=R4XEZ3_TAPDE
Related to ethanolaminephosphotransferase {ECO:0000313|EMBL:CCG83041.1}; TaxID=1097556 species="Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Taphrinomycetes; Taphrinales; Taphrinaceae; Taphrina.;" source="Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI; 108563 / JCM 9778 / NBRC 8474) (Peach leaf curl fungus) (Lalaria; deformans).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13858..15570
DNA (1713bp) protein (571aa)
acyl-CoA carboxylase (EC:6.4.1.3) rbh
Probable Acyl-CoA carboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMK6_SORC5 rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AGP36589.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15617..18442
DNA (2826bp) protein (942aa)
Biotin/lipoyl attachment domain n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMK3_SORC5 rbh
Biotin/lipoyl attachment domain {ECO:0000313|EMBL:CAN93450.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
biotin/lipoyl attachment domain-containing protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_15
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(18474..20573)
DNA (2100bp) protein (700aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Geobacter sp. (strain M21) RepID=C6DZ31_GEOSM
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Spirochaetes_49_21_curated
PAS/PAC sensor hybrid histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_16
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

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comp(20682..22001)
DNA (1320bp) protein (440aa)
hypothetical protein id=3433378 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein Tax=GWC2_Elusimicrobia_65_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_17
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(21998..23869)
DNA (1872bp) protein (624aa)
nitrogenase iron protein; K02588 nitrogenase iron protein NifH [EC:1.18.6.1] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Nitrogenase id=1892181 bin=GWA2_Elusimicrobia_69_24 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_18
unknown

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24066..24647
DNA (582bp) protein (194aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1053_19
unknown

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24644..25087
DNA (444bp) protein (148aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1053_20
unknown

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comp(25044..26264)
DNA (1221bp) protein (407aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1053_21
unknown

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comp(26271..26501)
DNA (231bp) protein (77aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1053_22
unknown

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comp(26501..26668)
DNA (168bp) protein (56aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1053_23

Not on your lists

comp(26665..28455)
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000377E575
Uncharacterized protein {ECO:0000313|EMBL:KKN67935.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
carbamoyl transferase, NodU family
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_24
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28598..29953)
DNA (1356bp) protein (452aa)
hypothetical protein id=3433346 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein Tax=GWC2_Elusimicrobia_65_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_25
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(29950..31845)
DNA (1896bp) protein (632aa)
nitrogenase subunit nifH Tax=RBG_16_Elusimicrobia_66_12_curated
Nitrogenase id=1892181 bin=GWA2_Elusimicrobia_69_24 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
08E140C01_z5_2013_Ig3399_v2_scaffold_1053_26
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

32153..33415
DNA (1263bp) protein (421aa)
Radical SAM domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8G4_METMS
radical SAM protein; K06937
Radical SAM domain protein {ECO:0000313|EMBL:ADE37452.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
Displaying 26 items

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