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08E140C01_z5_2013_Ig3399_v2_scaffold_1165

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_trna_3
unknown

Not on your lists

comp(1..73)
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_trna_2
unknown

Not on your lists

comp(185..257)
DNA (73bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_1
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

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comp(304..1329)
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit id=4079375 bin=GWF2_Bacteroidetes_39_10 species=Alistipes putredinis genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_2
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(1346..4417)
DNA (3072bp) protein (1024aa)
C-processing peptidase subfamily id=4079377 bin=GWF2_Bacteroidetes_39_10 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
peptidase S41
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_3
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(4442..5719)
DNA (1278bp) protein (426aa)
arginine deiminase id=1809351 bin=GWE2_Bacteroidetes_39_28 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_4
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(5730..6797)
DNA (1068bp) protein (356aa)
mannose-1-phosphate guanylyltransferase id=1809346 bin=GWE2_Bacteroidetes_39_28 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_5
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(6844..7257)
DNA (414bp) protein (138aa)
UPF0102 protein HMPREF9450_00703 id=1809342 bin=GWE2_Bacteroidetes_39_28 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_6
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(7348..10614)
DNA (3267bp) protein (1089aa)
Putative uncharacterized protein id=1809338 bin=GWE2_Bacteroidetes_39_28 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
OmpA-like protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_7
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

10972..12246
DNA (1275bp) protein (425aa)
S-adenosylmethionine synthetase id=4079387 bin=GWF2_Bacteroidetes_39_10 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_8
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(12243..12692)
DNA (450bp) protein (150aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein id=1809331 bin=GWE2_Bacteroidetes_39_28 species=Sulfuricurvum kujiense genus=Sulfuricurvum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_9
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(12717..13988)
DNA (1272bp) protein (424aa)
collagenase id=4079391 bin=GWF2_Bacteroidetes_39_10 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_10
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(14013..15050)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein id=1809323 bin=GWE2_Bacteroidetes_39_28 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_11
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(15031..15642)
DNA (612bp) protein (204aa)
Uncharacterized protein id=1809319 bin=GWE2_Bacteroidetes_39_28 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_12
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(15776..16753)
DNA (978bp) protein (326aa)
Polyprenyl synthetase id=1809316 bin=GWE2_Bacteroidetes_39_28 species=Bacteroides finegoldii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_13
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

16816..17757
DNA (942bp) protein (314aa)
Putative ribosome biogenesis GTPase RsgA id=1809313 bin=GWE2_Bacteroidetes_39_28 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_14
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

17754..19055
DNA (1302bp) protein (434aa)
DNA-damage-inducible protein F id=4079406 bin=GWF2_Bacteroidetes_39_10 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_15
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(19052..19627)
DNA (576bp) protein (192aa)
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
superoxide dismutase, iron id=4079443 bin=GWF2_Bacteroidetes_39_10 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_16
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

19726..22794
DNA (3069bp) protein (1023aa)
Two-component system sensor histidine kinase, with response regulator receiver domain id=4079446 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_17
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

22806..24761
DNA (1956bp) protein (652aa)
Fructose-1,6-bisphosphatase class 3 id=1809287 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_18
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(24758..25660)
DNA (903bp) protein (301aa)
Amidinotransferase id=1809285 bin=GWE2_Bacteroidetes_39_28 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_19
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(25705..26937)
DNA (1233bp) protein (411aa)
Ornithine aminotransferase id=4079456 bin=GWF2_Bacteroidetes_39_10 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
ornithine aminotransferase rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_20
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


27101..27499
DNA (399bp) protein (133aa)
30S ribosomal protein S12 id=1809281 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWE2_Bacteroidetes_39_28_curated
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_21
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists


27523..27999
DNA (477bp) protein (159aa)
30S ribosomal protein S7 id=4079464 bin=GWF2_Bacteroidetes_39_10 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
30S ribosomal protein S7
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_22
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

28019..30139
DNA (2121bp) protein (707aa)
Elongation factor G id=4079469 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
elongation factor G rbh
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_23
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists


30117..30464
DNA (348bp) protein (116aa)
30S ribosomal protein S10 id=4079477 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
30S ribosomal protein S10
Tax=BJP_IG2103_Bacteroidetes_40_10
08E140C01_z5_2013_Ig3399_v2_scaffold_1165_trna_1
unknown

Not on your lists

30529..30596
DNA (68bp)
transferRNA
Displaying 26 items

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