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08E140C01_z5_2013_Ig3399_v2_scaffold_1335

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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2..250
DNA (249bp) protein (83aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_2
unknown

Not on your lists

comp(317..580)
DNA (264bp) protein (88aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1335_3
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(734..883)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMK4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR70050.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_4
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1147..4134
DNA (2988bp) protein (996aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037C55E8 rbh
Putative two-component system sensor kinase/response regulator fusion protein {ECO:0000313|EMBL:AKA35086.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
two-component system sensor kinase/response regulator fusion protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_5
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4324..11448
DNA (7125bp) protein (2375aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XVV7_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KFD38680.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_6
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11478..13622
DNA (2145bp) protein (715aa)
CHU large protein; uncharacterized id=1970615 bin=GWE2_Bacteroidetes_42_24 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
putative calcium-binding protein Tax=GWF2_Bacteroidetes_43_11_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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13634..13870
DNA (237bp) protein (79aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14038..14514
DNA (477bp) protein (159aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14695..15057)
DNA (363bp) protein (121aa)
XRE family transcriptional regulator Tax=GWF2_Bacteroidetes_41_31_curated
Transcriptional regulator, XRE family id=1715067 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
XRE family transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_10
unknown

Not on your lists

comp(15415..16224)
DNA (810bp) protein (270aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1335_11

Not on your lists

comp(16697..19678)
DNA (2982bp) protein (994aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6C9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKK77981.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_12
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20138..20965)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIS9_CHIPD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJD31896.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_13
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20965..21849)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C2E0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ40315.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_14
unknown

Not on your lists

22626..23402
DNA (777bp) protein (259aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1335_15
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24069..25322
DNA (1254bp) protein (418aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J059_CYCMS rbh
RNA-directed DNA polymerase rbh
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:AEL27320.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_16
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25353..26801
DNA (1449bp) protein (483aa)
Putative uncharacterized protein id=3963246 bin=GWF2_Bacteroidetes_41_31 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Conserved hypothetical protein containing Fibronectin, type III domain Tax=GWF2_Bacteroidetes_41_31_curated
lipoprotein with several conserved repeats
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27476..27658
DNA (183bp) protein (61aa)
Putative uncharacterized protein id=4498435 bin=GWF2_Bacteroidetes_41_31 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
peptidase m28 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27985..29925
DNA (1941bp) protein (647aa)
signal transduction histidine kinase LytS Tax=GWF2_Bacteroidetes_41_31_curated
Signal transduction histidine kinase, LytS id=4498433 bin=GWF2_Bacteroidetes_41_31 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
signal transduction histidine kinase LytS
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29922..30674
DNA (753bp) protein (251aa)
Response regulator id=4498432 bin=GWF2_Bacteroidetes_41_31 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator Tax=GWF2_Bacteroidetes_41_31_curated
two component transcriptional regulator, LytTR family
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_20
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30718..31323
DNA (606bp) protein (202aa)
isochorismatase hydrolase id=4498431 bin=GWF2_Bacteroidetes_41_31 species=Bacillus coahuilensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
isochorismatase hydrolase Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31555..32754
DNA (1200bp) protein (400aa)
AraC family transcriptional regulator id=4498430 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
AraC family transcriptional regulator Tax=GWF2_Bacteroidetes_41_31_curated
AraC family transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_22
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32926..34032
DNA (1107bp) protein (369aa)
Putative uncharacterized protein id=4498429 bin=GWF2_Bacteroidetes_41_31 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
arabinogalactan endo-1,4-beta-galactosidase Tax=GWF2_Bacteroidetes_41_31_curated
arabinogalactan endo-1,4-beta-galactosidase
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34061..35473
DNA (1413bp) protein (471aa)
secreted protein with Fibrobacter succinogenes major domain id=4498428 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
TIR protein Tax=GWF2_Bacteroidetes_41_31_curated
TIR protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35666..36886
DNA (1221bp) protein (407aa)
WD40 domain protein beta Propeller id=4498413 bin=GWF2_Bacteroidetes_41_31 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
WD40 domain-containing protein beta Propeller Tax=GWF2_Bacteroidetes_41_31_curated
WD40 domain-containing protein beta Propeller
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36950..37555
DNA (606bp) protein (202aa)
Putative lipoprotein id=4498411 bin=GWF2_Bacteroidetes_41_31 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37710..39593
DNA (1884bp) protein (628aa)
Putative uncharacterized protein id=4498418 bin=GWF2_Bacteroidetes_41_31 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Aminopeptidase N Tax=GWF2_Bacteroidetes_41_31_curated
Aminopeptidase N
08E140C01_z5_2013_Ig3399_v2_scaffold_1335_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39646..41412
DNA (1767bp) protein (589aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Putative uncharacterized protein id=4498409 bin=GWF2_Bacteroidetes_41_31 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein
Displaying 27 items

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