ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_17_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..205)
DNA (204bp) protein (68aa)
id=4116215 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=4116215 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_17_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

876..3287
DNA (2412bp) protein (804aa)
outer membrane receptor protein Tax=GWF2_Bacteroidetes_41_31_curated
TonB-dependent receptor id=4116214 bin=GWF2_Bacteroidetes_41_31 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
outer membrane receptor protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3429..3776
DNA (348bp) protein (116aa)
Putative uncharacterized protein id=4116213 bin=GWF2_Bacteroidetes_41_31 species=Thermanaerovibrio velox genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Putative uncharacterized protein Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_17_4
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4034..4624
DNA (591bp) protein (197aa)
hypothetical protein MsalJ2_11639 id=4116212 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein MsalJ2_11639 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_17_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4637..5236
DNA (600bp) protein (200aa)
Putative uncharacterized protein id=4116193 bin=GWF2_Bacteroidetes_41_31 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_6
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5288..7309)
DNA (2022bp) protein (674aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Uncharacterized protein id=4116191 bin=GWF2_Bacteroidetes_41_31 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_7
Capnocytophaga sp. oral taxon 338, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7608..8912
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 338 str. F0234 RepID=F0IC10_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD35381.1}; TaxID=888059 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 338 str. F0234.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9186..10196
DNA (1011bp) protein (337aa)
Putative uncharacterized protein id=4116188 bin=GWF2_Bacteroidetes_41_31 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Putative uncharacterized protein Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_17_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10208..10570
DNA (363bp) protein (121aa)
Cupin 2 conserved barrel domain protein id=4116186 bin=GWF2_Bacteroidetes_41_31 species=Bacillus pumilus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_10
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10752..11153
DNA (402bp) protein (134aa)
Nickel-responsive transcriptional regulator NikR id=4116183 bin=GWF2_Bacteroidetes_41_31 species=Bergeyella zoohelcum genus=Bergeyella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
CopG family transcriptional regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator Tax=GWF2_Bacteroidetes_41_31_curated
CopG family transcriptional regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_17_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11170..11868
DNA (699bp) protein (233aa)
Putative truncated cobalamin biosynthesis protein id=4116180 bin=GWF2_Bacteroidetes_41_31 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
putative cobalamin biosynthesis protein; K02007 cobalt/nickel transport system permease protein Tax=GWF2_Bacteroidetes_41_31_curated
cobalt transport protein CbiM; K02007 cobalt/nickel transport system permease protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_12
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11861..12196
DNA (336bp) protein (112aa)
Cobalamin biosynthesis protein id=4116177 bin=GWF2_Bacteroidetes_41_31 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
cobalamin biosynthesis protein Tax=GWF2_Bacteroidetes_41_31_curated
cobalamin biosynthesis protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12186..13112
DNA (927bp) protein (309aa)
Cobalt transport protein id=4116174 bin=GWF2_Bacteroidetes_41_31 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=GWF2_Bacteroidetes_41_31_curated
cbiQ-1; putative ABC-type cobalt import system, permease component; K02008 cobalt/nickel transport system permease protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13119..13928
DNA (810bp) protein (270aa)
Putative ABC-type cobalt import system, ATPase component id=4116172 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
cbiO-1; putative ABC-type cobalt import system, ATPase component; K02006 cobalt/nickel transport system ATP-binding protein Tax=GWF2_Bacteroidetes_41_31_curated
cbiO-1; putative ABC-type cobalt import system, ATPase component; K02006 cobalt/nickel transport system ATP-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_15
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(14649..15527)
DNA (879bp) protein (293aa)
alpha/beta hydrolase; K01259 proline iminopeptidase [EC:3.4.11.5]
Alpha/beta hydrolase fold protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZH0_HALH1
hypothetical protein Tax=GWF1_Spirochaetes_49_6_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_17_16
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(15666..15902)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELF4_CLOPA
Acyltransferase 3 Tax=RBG_13_Planctomycetes_50_24_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_17_17
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(15921..16265)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6K9K8_9BACE
Acyltransferase 3 Tax=RBG_13_Planctomycetes_50_24_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_17_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16217..16771)
DNA (555bp) protein (185aa)
Acyltransferase 3 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIZ2_9SPHI
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_19
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16790..18004)
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AQF7_MARSH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR01696.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_17_20
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18136..19308)
DNA (1173bp) protein (391aa)
Transcriptional regulator, AraC family protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AQF6_MARSH rbh
AraC family transcriptional regulator Tax=RBG_13_Bacteroidetes_42_15_curated
AraC family transcriptional regulator rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_17_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20670..22574
DNA (1905bp) protein (635aa)
acetate--CoA ligase Tax=GWF2_Bacteroidetes_41_31_curated
Acetate--CoA ligase id=4116155 bin=GWF2_Bacteroidetes_41_31 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
acetate--CoA ligase
08E140C01_z5_2013_Ig3399_v2_scaffold_17_22
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22584..23465
DNA (882bp) protein (294aa)
WD40-like Beta Propeller, putative id=4116153 bin=GWF2_Bacteroidetes_41_31 species=Acaryochloris marina genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
WD-40-like beta propeller repeat-containing protein; K03641 TolB protein Tax=GWF2_Bacteroidetes_41_31_curated
WD-40-like beta propeller repeat-containing protein; K03641 TolB protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23590..24429
DNA (840bp) protein (280aa)
Membrane protease subunit stomatin/prohibitin-like protein id=4116151 bin=GWF2_Bacteroidetes_41_31 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
spfh domain, band 7 family protein Tax=GWF2_Bacteroidetes_41_31_curated
spfh domain, band 7 family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24598..25803)
DNA (1206bp) protein (402aa)
mdeA; methionine gamma-lyase (EC:4.4.1.11); K01761 methionine-gamma-lyase [EC:4.4.1.11] Tax=GWF2_Bacteroidetes_41_31_curated
mdeA; methionine gamma-lyase (EC:4.4.1.11); K01761 methionine-gamma-lyase [EC:4.4.1.11]
Cys/Met metabolism PLP-dependent enzyme family protein id=4116149 bin=GWF2_Bacteroidetes_41_31 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_17_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25937..27742)
DNA (1806bp) protein (602aa)
fibronectin type III domain-containing protein Tax=GWF2_Bacteroidetes_41_31_curated
Fibronectin type III domain protein id=4116147 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Lacinutrix taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
fibronectin type III domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27762..29825)
DNA (2064bp) protein (688aa)
Lipid A core-O-antigen ligase-like enyme id=4116145 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Lipid A core--O-antigen ligase-like protein Tax=GWF2_Bacteroidetes_41_31_curated
Lipid A core--O-antigen ligase-like protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29876..31690
DNA (1815bp) protein (605aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Putative uncharacterized protein id=4116142 bin=GWF2_Bacteroidetes_41_31 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31724..32866)
DNA (1143bp) protein (381aa)
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5] Tax=GWF2_Bacteroidetes_41_31_curated
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome-c peroxidase id=4116139 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Lacinutrix taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_17_29
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32863..33687)
DNA (825bp) protein (275aa)
Putative uncharacterized protein id=4116132 bin=GWF2_Bacteroidetes_41_31 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_17_30
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33701..34069)
DNA (369bp) protein (123aa)
id=4116131 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=4116131 Tax=GWF2_Bacteroidetes_41_31_curated
Displaying items 1-30 of 252 in total

View Taxonomy