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08E140C01_z5_2013_Ig3399_v2_scaffold_54

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Displaying items 1-30 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_54_trna_3
unknown

Not on your lists

comp(66..139)
DNA (74bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_54_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

258..2456
DNA (2199bp) protein (733aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Putative uncharacterized protein id=3962921 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2521..4599
DNA (2079bp) protein (693aa)
wd40-like beta propeller containing protein Tax=GWF2_Bacteroidetes_41_31_curated
WD40-like beta Propeller containing protein id=3962922 bin=GWF2_Bacteroidetes_41_31 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
wd40-like beta propeller containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4727..6049
DNA (1323bp) protein (441aa)
nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=GWF2_Bacteroidetes_41_31_curated
nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
UDP-glucose 6-dehydrogenase id=3962923 bin=GWF2_Bacteroidetes_41_31 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_4
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6120..7061
DNA (942bp) protein (314aa)
Putative dNTP-hexose dehydratase-epimerase id=3962924 bin=GWF2_Bacteroidetes_41_31 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
dNTP-hexose dehydratase-epimerase Tax=GWF2_Bacteroidetes_41_31_curated
dNTP-hexose dehydratase-epimerase
08E140C01_z5_2013_Ig3399_v2_scaffold_54_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7058..7918
DNA (861bp) protein (287aa)
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=GWF2_Bacteroidetes_41_31_curated
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] rbh
dTDP-6-deoxy-L-mannose-dehydrogenase id=3962925 bin=GWF2_Bacteroidetes_41_31 species=Sulfurimonas gotlandica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_6
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7930..9669
DNA (1740bp) protein (580aa)
pgm; phosphomannomutase (EC:5.4.2.8); K01835 phosphoglucomutase [EC:5.4.2.2] Tax=GWF2_Bacteroidetes_41_31_curated
pgm; phosphomannomutase (EC:5.4.2.8); K01835 phosphoglucomutase [EC:5.4.2.2] rbh
Phosphomannomutase id=3962926 bin=GWF2_Bacteroidetes_41_31 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9666..10199
DNA (534bp) protein (178aa)
Uncharacterized protein id=3962927 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10282..12765
DNA (2484bp) protein (828aa)
ferrous iron transport protein b; K04759 ferrous iron transport protein B Tax=GWF2_Bacteroidetes_41_31_curated
Ferrous iron transport protein B id=3962928 bin=GWF2_Bacteroidetes_41_31 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ferrous iron transport protein b; K04759 ferrous iron transport protein B
08E140C01_z5_2013_Ig3399_v2_scaffold_54_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12920..13267
DNA (348bp) protein (116aa)
PAS domain S-box id=3962930 bin=GWF2_Bacteroidetes_41_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
PAS domain S-box Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_54_10
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13262..14290)
DNA (1029bp) protein (343aa)
Tetratricopeptide TPR_1 repeat-containing protein id=3962931 bin=GWF2_Bacteroidetes_41_31 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14376..15401)
DNA (1026bp) protein (342aa)
recombinase A id=3962932 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
recombinase A; K03553 recombination protein RecA Tax=GWF2_Bacteroidetes_41_31_curated
recombinase A; K03553 recombination protein RecA
08E140C01_z5_2013_Ig3399_v2_scaffold_54_12
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15415..15873)
DNA (459bp) protein (153aa)
bacterioferritin comigratory protein (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=GWF2_Bacteroidetes_41_31_curated
bacterioferritin comigratory protein (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin id=3962934 bin=GWF2_Bacteroidetes_41_31 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15938..16588)
DNA (651bp) protein (217aa)
endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=GWF2_Bacteroidetes_41_31_curated
endonuclease III; K10773 endonuclease III [EC:4.2.99.18]
endonuclease III id=3962936 bin=GWF2_Bacteroidetes_41_31 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16970..19018)
DNA (2049bp) protein (683aa)
acyl-CoA synthetase Tax=GWF2_Bacteroidetes_41_31_curated
AMP-binding enzyme domain protein id=3962938 bin=GWF2_Bacteroidetes_41_31 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
acyl-CoA synthetase
08E140C01_z5_2013_Ig3399_v2_scaffold_54_15
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19153..19926)
DNA (774bp) protein (258aa)
Two component transcriptional regulator, LytTR family id=3962941 bin=GWF2_Bacteroidetes_41_31 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
two component transcriptional regulator, LytTR family Tax=GWF2_Bacteroidetes_41_31_curated
two component transcriptional regulator, LytTR family
08E140C01_z5_2013_Ig3399_v2_scaffold_54_16
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19935..21023)
DNA (1089bp) protein (363aa)
Signal transduction histidine kinase, LytS id=3962991 bin=GWF2_Bacteroidetes_41_31 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
signal transduction histidine kinase LytS Tax=GWF2_Bacteroidetes_41_31_curated
signal transduction histidine kinase LytS
08E140C01_z5_2013_Ig3399_v2_scaffold_54_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21237..23384)
DNA (2148bp) protein (716aa)
TonB-dependent receptor family protein Tax=GWF2_Bacteroidetes_41_31_curated
TonB-dependent receptor family protein id=3962999 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
TonB-dependent receptor family protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23385..24191)
DNA (807bp) protein (269aa)
Uncharacterized protein id=3963001 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24282..25088)
DNA (807bp) protein (269aa)
Uncharacterized protein id=3963003 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_20
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25091..25579)
DNA (489bp) protein (163aa)
Uncharacterized protein id=3963005 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25576..26298)
DNA (723bp) protein (241aa)
ABC-2 type transporter id=3963007 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ABC transporter Tax=GWF2_Bacteroidetes_41_31_curated
ABC transporter
08E140C01_z5_2013_Ig3399_v2_scaffold_54_22
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26295..27140)
DNA (846bp) protein (282aa)
ABC-type multidrug transport system, ATPase component id=3963014 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
multidrug ABC transporter ATPase Tax=GWF2_Bacteroidetes_41_31_curated
multidrug ABC transporter ATPase
08E140C01_z5_2013_Ig3399_v2_scaffold_54_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27121..27993)
DNA (873bp) protein (291aa)
SagB-type dehydrogenase domain protein id=3963020 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
SagB-type dehydrogenase domain-containing protein Tax=GWF2_Bacteroidetes_41_31_curated
SagB-type dehydrogenase domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28079..29380)
DNA (1302bp) protein (434aa)
Bacteriocin biosynthesis docking scaffold, SagD family id=3963023 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
bacteriocin biosynthesis docking scaffold, SagD family Tax=GWF2_Bacteroidetes_41_31_curated
bacteriocin biosynthesis docking scaffold, SagD family rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_54_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29391..30380)
DNA (990bp) protein (330aa)
Bacteriocin biosynthesis cyclodehydratase domain protein id=3963026 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
bacteriocin biosynthesis cyclodehydratase domain protein Tax=GWF2_Bacteroidetes_41_31_curated
bacteriocin biosynthesis cyclodehydratase domain protein
08E140C01_z5_2013_Ig3399_v2_scaffold_54_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30508..30669
DNA (162bp) protein (54aa)
id=3963030 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3963030 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_54_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30838..31188)
DNA (351bp) protein (117aa)
Response regulator of the LytR/AlgR family id=3963031 bin=GWF2_Bacteroidetes_41_31 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
response regulator of the LytR/AlgR family Tax=GWF2_Bacteroidetes_41_31_curated
response regulator of the LytR/AlgR family
08E140C01_z5_2013_Ig3399_v2_scaffold_54_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31204..31647)
DNA (444bp) protein (148aa)
id=3963034 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3963034 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_54_29
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31924..35397)
DNA (3474bp) protein (1158aa)
peptidase S41; K08676 tricorn protease [EC:3.4.21.-] Tax=GWF2_Bacteroidetes_41_31_curated
peptidase S41; K08676 tricorn protease [EC:3.4.21.-]
tricorn protease id=3963036 bin=GWF2_Bacteroidetes_41_31 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Displaying items 1-30 of 179 in total

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