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08E140C01_z5_2013_Ig3399_v2_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_320_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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163..789
DNA (627bp) protein (209aa)
Two component transcriptional regulator, LuxR family id=3007822 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
LuxR family two component transcriptional regulator Tax=GWF2_Bacteroidetes_41_31_curated
LuxR family two component transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_320_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

963..1859
DNA (897bp) protein (299aa)
Internalin-related protein id=3007820 bin=GWF2_Bacteroidetes_41_31 species=Nonlabens dokdonensis genus=Nonlabens taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
fibronectin type III domain protein Tax=GWF2_Bacteroidetes_41_31_curated
fibronectin type III domain protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1910..2344
DNA (435bp) protein (145aa)
id=3007819 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3007819 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_320_4
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2550..3854
DNA (1305bp) protein (435aa)
KWG repeat domain protein id=3007817 bin=GWF2_Bacteroidetes_41_31 species=Capnocytophaga sp. oral taxon 326 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
S-layer protein Tax=GWF2_Bacteroidetes_41_31_curated
KWG repeat-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3960..4160
DNA (201bp) protein (67aa)
Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_320_6
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4110..4658)
DNA (549bp) protein (183aa)
id=3007815 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
id=3007815 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_320_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4697..5281)
DNA (585bp) protein (195aa)
Putative uncharacterized protein id=3007631 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_8
unknown

Not on your lists

5396..5536
DNA (141bp) protein (47aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_320_9
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5489..6997)
DNA (1509bp) protein (503aa)
Conserved repeat domain protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VXD8_9FLAO
Conserved repeat domain protein {ECO:0000313|EMBL:EPR74786.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_10
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7669..8928
DNA (1260bp) protein (420aa)
DNA/RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=GWF2_Bacteroidetes_41_31_curated
DNA/RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] rbh
DNA/RNA helicase, superfamily II id=3007624 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_320_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8933..10690)
DNA (1758bp) protein (586aa)
Putative uncharacterized protein id=3007622 bin=GWF2_Bacteroidetes_41_31 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_12
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11009..12340)
DNA (1332bp) protein (444aa)
MATE efflux family protein id=3007616 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
antiporter membrane protein Tax=GWF2_Bacteroidetes_41_31_curated
antiporter membrane protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12749..13123
DNA (375bp) protein (125aa)
Membrane family protein id=3007610 bin=GWF2_Bacteroidetes_41_31 species=Prevotella buccalis genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13232..13750)
DNA (519bp) protein (173aa)
id=3007609 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
id=3007609 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_320_15
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13851..15380
DNA (1530bp) protein (510aa)
GMP synthase large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=GWF2_Bacteroidetes_41_31_curated
GMP synthase large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
GMP synthase [glutamine-hydrolyzing] id=3007606 bin=GWF2_Bacteroidetes_41_31 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_320_16
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15733..16044
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C330_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16276..18963
DNA (2688bp) protein (896aa)
LysM domain-containing protein (EC:3.4.-.-); K01423 [EC:3.4.-.-]
LysM domain-containing protein id=2703443 bin=GWF2_Bacteroidetes_41_31 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
peptidoglycan-binding lysin domain protein Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_320_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18960..19610
DNA (651bp) protein (217aa)
Phophatidylinositol-4-phosphate 5-kinase id=2703445 bin=GWF2_Bacteroidetes_41_31 species=Fusobacterium nucleatum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19671..21230)
DNA (1560bp) protein (520aa)
BlaR1 peptidase M56 id=2703447 bin=GWF2_Bacteroidetes_41_31 species=Prevotella intermedia genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
TonB-dependent receptor Tax=GWF2_Bacteroidetes_41_31_curated
TonB family protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_20
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21241..21618)
DNA (378bp) protein (126aa)
CopY family transcriptional repressor id=2703449 bin=GWF2_Bacteroidetes_41_31 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
transcriptional repressor, CopY family; K07737 putative transcriptional regulator Tax=GWF2_Bacteroidetes_41_31_curated
transcriptional repressor, CopY family; K07737 putative transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_320_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21896..23233
DNA (1338bp) protein (446aa)
gdhB; NAD-specific glutamate dehydrogenase 1; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=GWF2_Bacteroidetes_41_31_curated
gdhB; NAD-specific glutamate dehydrogenase 1; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
NAD-specific glutamate dehydrogenase id=2703451 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_320_22
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23404..24924
DNA (1521bp) protein (507aa)
Amino acid/peptide transporter id=2703453 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
H+/peptide symporter Tax=GWF2_Bacteroidetes_41_31_curated
H+/peptide symporter
08E140C01_z5_2013_Ig3399_v2_scaffold_320_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25032..25985
DNA (954bp) protein (318aa)
TIGR01212 family radical SAM protein id=2703455 bin=GWF2_Bacteroidetes_41_31 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
radical SAM protein, TIGR01212 family Tax=GWF2_Bacteroidetes_41_31_curated
radical SAM protein, TIGR01212 family
08E140C01_z5_2013_Ig3399_v2_scaffold_320_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26096..27010
DNA (915bp) protein (305aa)
Putative uncharacterized protein id=2703459 bin=GWF2_Bacteroidetes_41_31 species=uncultured bacterium Rlip1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27099..27752
DNA (654bp) protein (218aa)
Putative uncharacterized protein id=2703461 bin=GWF2_Bacteroidetes_41_31 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27749..28039
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=2703463 bin=GWF2_Bacteroidetes_41_31 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28099..29442
DNA (1344bp) protein (448aa)
Inner membrane CreD family protein id=2703465 bin=GWF2_Bacteroidetes_41_31 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
colicin E2 resistance inner membrane protein Tax=GWF2_Bacteroidetes_41_31_curated
colicin E2 resistance inner membrane protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_320_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30064..32970
DNA (2907bp) protein (969aa)
Putative uncharacterized protein id=2703471 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
peptidase M4, thermolysin Tax=GWF2_Bacteroidetes_41_31_curated
peptidase M4, thermolysin
08E140C01_z5_2013_Ig3399_v2_scaffold_320_29
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33278..34684
DNA (1407bp) protein (469aa)
citrate transporter id=2703477 bin=GWF2_Bacteroidetes_41_31 species=Pseudomonas sp. S9 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_320_30
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34729..35760)
DNA (1032bp) protein (344aa)
Anhydro-N-acetylmuramic acid kinase id=2703481 bin=GWF2_Bacteroidetes_41_31 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
molecular chaperone Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
Displaying items 1-30 of 64 in total

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