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08E140C01_z5_2013_Ig3399_v2_scaffold_377

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_377_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(74..1336)
DNA (1263bp) protein (421aa)
Histidine kinase id=3007825 bin=GWF2_Bacteroidetes_41_31 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
histidine kinase Tax=GWF2_Bacteroidetes_41_31_curated
histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_377_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1341..2543)
DNA (1203bp) protein (401aa)
Diguanylate cyclase id=3007827 bin=GWF2_Bacteroidetes_41_31 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
diguanylate cyclase Tax=GWF2_Bacteroidetes_41_31_curated
diguanylate cyclase
08E140C01_z5_2013_Ig3399_v2_scaffold_377_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2733..3260)
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=3007829 bin=GWF2_Bacteroidetes_41_31 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_377_4
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3264..3911)
DNA (648bp) protein (216aa)
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWF2_Bacteroidetes_41_31_curated
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase id=3007832 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_377_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3964..4827)
DNA (864bp) protein (288aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily id=3007836 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
sigma-70 family RNA polymerase sigma factor Tax=GWF2_Bacteroidetes_41_31_curated
sigma-70 family RNA polymerase sigma factor
08E140C01_z5_2013_Ig3399_v2_scaffold_377_6
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4880..7132)
DNA (2253bp) protein (751aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Polyribonucleotide nucleotidyltransferase id=3007838 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_377_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7227..7496)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 id=3007840 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=GWF2_Bacteroidetes_41_31_curated
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
08E140C01_z5_2013_Ig3399_v2_scaffold_377_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7696..8211)
DNA (516bp) protein (172aa)
Uncharacterized protein id=3007842 bin=GWF2_Bacteroidetes_41_31 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Uncharacterized protein Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_377_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8252..9421)
DNA (1170bp) protein (390aa)
Uncharacterized protein id=3007857 bin=GWF2_Bacteroidetes_41_31 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_377_10
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9437..9982)
DNA (546bp) protein (182aa)
id=3007866 Tax=GWF2_Bacteroidetes_41_31_curated
id=3007866 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_377_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10046..10723)
DNA (678bp) protein (226aa)
antimicrobial peptide ABC transporter ATPase id=3007867 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
antimicrobial peptide ABC transporter ATPase Tax=GWF2_Bacteroidetes_41_31_curated
antimicrobial peptide ABC transporter ATPase
08E140C01_z5_2013_Ig3399_v2_scaffold_377_12
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10737..11972)
DNA (1236bp) protein (412aa)
ABC-type transport system (Lipoprotein release), permease component id=3007871 bin=GWF2_Bacteroidetes_41_31 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ABC-type transport system (lipoprotein release), permease component Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_377_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11984..13204)
DNA (1221bp) protein (407aa)
ABC-type transport system (Lipoprotein release), permease component id=3007874 bin=GWF2_Bacteroidetes_41_31 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ABC-type transport system (lipoprotein release), permease component Tax=GWF2_Bacteroidetes_41_31_curated
ABC-type transport system (lipoprotein release), permease component
08E140C01_z5_2013_Ig3399_v2_scaffold_377_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13244..14032)
DNA (789bp) protein (263aa)
Outer membrane lipoprotein-sorting protein id=3007877 bin=GWF2_Bacteroidetes_41_31 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_377_15
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14034..14609)
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family id=3007880 bin=GWF2_Bacteroidetes_41_31 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
transcriptional regulator, TetR family Tax=GWF2_Bacteroidetes_41_31_curated
transcriptional regulator, TetR family
08E140C01_z5_2013_Ig3399_v2_scaffold_377_16
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14981..15793
DNA (813bp) protein (271aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=GWF2_Bacteroidetes_41_31_curated
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD id=3008045 bin=GWF2_Bacteroidetes_41_31 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_377_17
unknown

Not on your lists

comp(15987..16745)
DNA (759bp) protein (253aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_377_18
unknown

Not on your lists

16925..17137
DNA (213bp) protein (71aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_377_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17126..18082)
DNA (957bp) protein (319aa)
putative cytochrome c (EC:1.1.99.3) Tax=GWF2_Bacteroidetes_41_31_curated
putative cytochrome c (EC:1.1.99.3)
Cytochrome c id=3008053 bin=GWF2_Bacteroidetes_41_31 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_377_20
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18236..20161)
DNA (1926bp) protein (642aa)
Peptidase M1 membrane alanine aminopeptidase id=3008056 bin=GWF2_Bacteroidetes_41_31 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
peptidase M1 membrane alanine aminopeptidase Tax=GWF2_Bacteroidetes_41_31_curated
peptidase M1 membrane alanine aminopeptidase
08E140C01_z5_2013_Ig3399_v2_scaffold_377_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20416..20949
DNA (534bp) protein (178aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) Tax=GWF2_Bacteroidetes_41_31_curated
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase id=3008058 bin=GWF2_Bacteroidetes_41_31 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_377_22
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21141..21869)
DNA (729bp) protein (243aa)
hypothetical protein; K05303 O-methyltransferase [EC:2.1.1.-] Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein; K05303 O-methyltransferase [EC:2.1.1.-]
Putative uncharacterized protein id=3008060 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_377_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21969..23261)
DNA (1293bp) protein (431aa)
FolC bifunctional protein (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=GWF2_Bacteroidetes_41_31_curated
FolC bifunctional protein (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC bifunctional protein id=3008076 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_377_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23286..24176)
DNA (891bp) protein (297aa)
Putative uncharacterized protein id=3008078 bin=GWF2_Bacteroidetes_41_31 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_377_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24193..24606)
DNA (414bp) protein (138aa)
Putative tansport related protein id=3008081 bin=GWF2_Bacteroidetes_41_31 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
exbD; ExbD/TolR family biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=GWF2_Bacteroidetes_41_31_curated
tansport-like protein; K03559 biopolymer transport protein ExbD
08E140C01_z5_2013_Ig3399_v2_scaffold_377_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24624..25310)
DNA (687bp) protein (229aa)
biopolymer transport protein ExbB id=3008084 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
biopolymer transport protein; K03561 biopolymer transport protein ExbB Tax=GWF2_Bacteroidetes_41_31_curated
biopolymer transport protein; K03561 biopolymer transport protein ExbB
08E140C01_z5_2013_Ig3399_v2_scaffold_377_27
unknown

Not on your lists

comp(25345..25575)
DNA (231bp) protein (77aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_377_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25645..26172
DNA (528bp) protein (176aa)
RNA polymerase, sigma-24 subunit, ecf subfamily protein id=3008091 bin=GWF2_Bacteroidetes_41_31 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_Bacteroidetes_41_31_curated
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
08E140C01_z5_2013_Ig3399_v2_scaffold_377_29
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26141..26725
DNA (585bp) protein (195aa)
id=3008098 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
id=3008098 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_377_30
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26747..27283
DNA (537bp) protein (179aa)
Putative uncharacterized protein id=3008099 bin=GWF2_Bacteroidetes_41_31 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
Displaying items 1-30 of 77 in total

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