ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_541

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_541_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
id=3008755 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3008755 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_541_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

246..635
DNA (390bp) protein (130aa)
L-alanyl-D-glutamate peptidase (EC:3.4.-.-) Tax=GWF2_Bacteroidetes_41_31_curated
L-alanyl-D-glutamate peptidase (EC:3.4.-.-)
L-alanyl-D-glutamate peptidase id=3008749 bin=GWF2_Bacteroidetes_41_31 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
08E140C01_z5_2013_Ig3399_v2_scaffold_541_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

686..1255
DNA (570bp) protein (190aa)
id=3008747 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
id=3008747 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_541_4
unknown

Not on your lists

1870..1998
DNA (129bp) protein (43aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_541_5
unknown

Not on your lists

2176..2334
DNA (159bp) protein (53aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_541_6
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2412..3245)
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=4372060 bin=GWF2_Bacteroidetes_41_31 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3247..5916)
DNA (2670bp) protein (890aa)
outer membrane receptor protein Tax=GWF2_Bacteroidetes_41_31_curated
Outer membrane receptor protein id=4372062 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
outer membrane receptor protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5929..6795)
DNA (867bp) protein (289aa)
Putative uncharacterized protein id=4372064 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Putative uncharacterized protein Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_541_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7141..8481
DNA (1341bp) protein (447aa)
outer membrane efflux protein; K12340 outer membrane channel protein Tax=GWF2_Bacteroidetes_41_31_curated
Putative outer membrane lipoprotein id=4372066 bin=GWF2_Bacteroidetes_41_31 species=unidentified eubacterium SCB49 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
outer membrane efflux protein; K12340 outer membrane channel protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_10
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8492..9721
DNA (1230bp) protein (410aa)
Efflux transporter, RND family, MFP subunit id=4372068 bin=GWF2_Bacteroidetes_41_31 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9724..10473
DNA (750bp) protein (250aa)
ABC transporter related protein id=4372070 bin=GWF2_Bacteroidetes_41_31 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=GWF2_Bacteroidetes_41_31_curated
Macrolide-specific ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_12
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10486..11706
DNA (1221bp) protein (407aa)
hypothetical protein AtheD1_04592 id=4372072 bin=GWF2_Bacteroidetes_41_31 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein; K02004 putative ABC transport system permease protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_541_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11780..12880
DNA (1101bp) protein (367aa)
signal transduction histidine kinase, LytS id=4372074 bin=GWF2_Bacteroidetes_41_31 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
putative regulator of cell autolysis Tax=GWF2_Bacteroidetes_41_31_curated
putative regulator of cell autolysis
08E140C01_z5_2013_Ig3399_v2_scaffold_541_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12877..13587
DNA (711bp) protein (237aa)
LytTR family two component transcriptional regulator id=4372076 bin=GWF2_Bacteroidetes_41_31 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
LytTR family two component transcriptional regulator Tax=GWF2_Bacteroidetes_41_31_curated
LytTR family two component transcriptional regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_541_15
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13748..14944
DNA (1197bp) protein (399aa)
Binding-protein-dependent transport systems inner membrane component id=4372078 bin=GWF2_Bacteroidetes_41_31 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=GWF2_Bacteroidetes_41_31_curated
dipeptide/oligopeptide/nickel ABC transporter permease
08E140C01_z5_2013_Ig3399_v2_scaffold_541_16
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14951..16090)
DNA (1140bp) protein (380aa)
Uncharacterized protein id=4372080 bin=GWF2_Bacteroidetes_41_31 species=Riemerella anatipestifer genus=Riemerella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_541_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16065..16988)
DNA (924bp) protein (308aa)
PAP2 superfamily protein id=4372082 bin=GWF2_Bacteroidetes_41_31 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
PAP2 superfamily protein Tax=GWF2_Bacteroidetes_41_31_curated
phosphoesterase pa-phosphatase related protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17115..18593
DNA (1479bp) protein (493aa)
alpha-L-fucosidase (EC:3.2.1.51); K01206 alpha-L-fucosidase [EC:3.2.1.51] Tax=GWF2_Bacteroidetes_41_31_curated
alpha-L-fucosidase (EC:3.2.1.51); K01206 alpha-L-fucosidase [EC:3.2.1.51] rbh
Alpha-L-fucosidase id=4372111 bin=GWF2_Bacteroidetes_41_31 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_541_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18619..20772)
DNA (2154bp) protein (718aa)
Beta-glucosidase Tax=GWF2_Bacteroidetes_41_31_curated
beta-glucosidase id=4372112 bin=GWF2_Bacteroidetes_41_31 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Beta-glucosidase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_541_20
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20913..21884
DNA (972bp) protein (324aa)
Putative uncharacterized protein id=4372113 bin=GWF2_Bacteroidetes_41_31 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21907..23421)
DNA (1515bp) protein (505aa)
Putative uncharacterized protein id=4372114 bin=GWF2_Bacteroidetes_41_31 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_trna_1
unknown

Not on your lists

23616..23697
DNA (82bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_541_22
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23729..25084
DNA (1356bp) protein (452aa)
trigger factor id=4372116 bin=GWF2_Bacteroidetes_41_31 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
trigger factor; K03545 trigger factor Tax=GWF2_Bacteroidetes_41_31_curated
trigger factor; K03545 trigger factor
08E140C01_z5_2013_Ig3399_v2_scaffold_541_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25093..25773
DNA (681bp) protein (227aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=GWF2_Bacteroidetes_41_31_curated
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
ATP-dependent Clp protease proteolytic subunit id=4372117 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_541_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25809..27050
DNA (1242bp) protein (414aa)
ATP-dependent Clp protease ATP-binding subunit ClpX id=4372118 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=GWF2_Bacteroidetes_41_31_curated
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
08E140C01_z5_2013_Ig3399_v2_scaffold_541_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27062..27670
DNA (609bp) protein (203aa)
Putative uncharacterized protein id=4372119 bin=GWF2_Bacteroidetes_41_31 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27741..29123
DNA (1383bp) protein (461aa)
phosphoglucomutase/phosphomannomutase family protein; K01840 phosphomannomutase [EC:5.4.2.8] Tax=GWF2_Bacteroidetes_41_31_curated
phosphoglucomutase/phosphomannomutase family protein; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphomannomutase id=4372120 bin=GWF2_Bacteroidetes_41_31 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_541_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29164..29643
DNA (480bp) protein (160aa)
Uncharacterized protein id=4372121 bin=GWF2_Bacteroidetes_41_31 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_541_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29735..29902
DNA (168bp) protein (56aa)
id=4372122 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=4372122 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_541_29
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29844..30023
DNA (180bp) protein (60aa)
id=4372123 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=4372123 Tax=GWF2_Bacteroidetes_41_31_curated
Displaying items 1-30 of 53 in total

View Taxonomy