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08E140C01_z5_2013_Ig3399_v2_scaffold_744

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_744_1
unknown

Not on your lists

comp(62..265)
DNA (204bp) protein (68aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_744_2
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(359..1681)
DNA (1323bp) protein (441aa)
Na(+)/H(+) antiporter NhaA id=3052019 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Na(+)/H(+) antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family Tax=GWF2_Bacteroidetes_41_31_curated
Na(+)/H(+) antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_744_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1855..2418
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=3052016 bin=GWF2_Bacteroidetes_41_31 species=Candidatus Amoebophilus asiaticus genus=Candidatus Amoebophilus taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_744_4
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2534..4426
DNA (1893bp) protein (631aa)
two-component hybrid sensor and regulator Tax=GWF2_Bacteroidetes_41_31_curated
Two-component hybrid sensor and regulator id=3052014 bin=GWF2_Bacteroidetes_41_31 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
two-component hybrid sensor and regulator
08E140C01_z5_2013_Ig3399_v2_scaffold_744_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4557..5636
DNA (1080bp) protein (360aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=GWF2_Bacteroidetes_41_31_curated
fructose-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] rbh
Fructose-bisphosphate aldolase id=3052012 bin=GWF2_Bacteroidetes_41_31 species=Nitratifractor salsuginis genus=Nitratifractor taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_744_6
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5763..6164
DNA (402bp) protein (134aa)
id=3052011 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3052011 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_744_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6543..8336)
DNA (1794bp) protein (598aa)
fadD; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWF2_Bacteroidetes_41_31_curated
fadD; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
long chain fatty-acid CoA ligase id=3223914 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_744_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8397..8834)
DNA (438bp) protein (146aa)
id=3223913 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3223913 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_744_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8840..9223)
DNA (384bp) protein (128aa)
id=3223912 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
id=3223912 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_744_10
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9210..9656)
DNA (447bp) protein (149aa)
RNA polymerase ECF-type sigma factor id=3223908 bin=GWF2_Bacteroidetes_41_31 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_Bacteroidetes_41_31_curated
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
08E140C01_z5_2013_Ig3399_v2_scaffold_744_11
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10442..11254
DNA (813bp) protein (271aa)
5'-nucleotidase, lipoprotein e(P4) family id=3223904 bin=GWF2_Bacteroidetes_41_31 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
5'-nucleotidase Tax=GWF2_Bacteroidetes_41_31_curated
5'-nucleotidase
08E140C01_z5_2013_Ig3399_v2_scaffold_744_12
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11251..12237
DNA (987bp) protein (329aa)
Putative dihydroflavonol 4-reductase id=3223901 bin=GWF2_Bacteroidetes_41_31 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
NAD-dependent epimerase/dehydratase Tax=GWF2_Bacteroidetes_41_31_curated
NAD-dependent epimerase/dehydratase
08E140C01_z5_2013_Ig3399_v2_scaffold_744_13
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12234..13022
DNA (789bp) protein (263aa)
3-oxo-5-alpha-steroid 4-dehydrogenase 1 id=3223898 bin=GWF2_Bacteroidetes_41_31 species=SAR86 cluster bacterium SAR86B genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
3-oxo-5-alpha-steroid 4-dehydrogenase family protein Tax=GWF2_Bacteroidetes_41_31_curated
3-oxo-5-alpha-steroid 4-dehydrogenase domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_744_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13102..15009
DNA (1908bp) protein (636aa)
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase Tax=GWF2_Bacteroidetes_41_31_curated
1-deoxy-D-xylulose-5-phosphate synthase id=3223895 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_744_15
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15199..15780
DNA (582bp) protein (194aa)
Holliday junction DNA helicase subunit RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=GWF2_Bacteroidetes_41_31_curated
Holliday junction DNA helicase subunit RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA id=3223892 bin=GWF2_Bacteroidetes_41_31 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_744_16
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15825..23132
DNA (7308bp) protein (2436aa)
Putative uncharacterized protein id=3223889 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_744_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23222..23602
DNA (381bp) protein (127aa)
Glycine cleavage system H protein id=3223886 bin=GWF2_Bacteroidetes_41_31 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
glycine cleavage system h protein; K02437 glycine cleavage system H protein Tax=GWF2_Bacteroidetes_41_31_curated
glycine cleavage system h protein; K02437 glycine cleavage system H protein
08E140C01_z5_2013_Ig3399_v2_scaffold_744_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23614..24012
DNA (399bp) protein (133aa)
Putative integral membrane protein id=3223883 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_744_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24068..24745
DNA (678bp) protein (226aa)
Protein containing TonB, C-terminal domain id=3223761 bin=GWF2_Bacteroidetes_41_31 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
TonB family protein; K03832 periplasmic protein TonB Tax=GWF2_Bacteroidetes_41_31_curated
TonB family protein; K03832 periplasmic protein TonB
08E140C01_z5_2013_Ig3399_v2_scaffold_744_20
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24816..26624)
DNA (1809bp) protein (603aa)
UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=GWF2_Bacteroidetes_41_31_curated
UvrABC system protein C id=3223759 bin=GWF2_Bacteroidetes_41_31 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
UvrABC system protein C; K03703 excinuclease ABC subunit C
08E140C01_z5_2013_Ig3399_v2_scaffold_744_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26690..28654)
DNA (1965bp) protein (655aa)
nhaC; Na+/H+ antiporter NhaC Tax=GWF2_Bacteroidetes_41_31_curated
Na+/H+ antiporter NhaC id=3223757 bin=GWF2_Bacteroidetes_41_31 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
nhaC; Na+/H+ antiporter NhaC
08E140C01_z5_2013_Ig3399_v2_scaffold_744_22
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28712..29485)
DNA (774bp) protein (258aa)
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=GWF2_Bacteroidetes_41_31_curated
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein id=3223755 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_744_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29521..31437)
DNA (1917bp) protein (639aa)
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Tetratricopeptide-like helical id=3223752 bin=GWF2_Bacteroidetes_41_31 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_744_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31449..31949)
DNA (501bp) protein (167aa)
id=3223751 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
id=3223751 Tax=GWF2_Bacteroidetes_41_31_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_744_25
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31949..33220)
DNA (1272bp) protein (424aa)
Seryl-tRNA synthetase id=3223749 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
seryl-tRNA synthetase Tax=GWF2_Bacteroidetes_41_31_curated
seryl-tRNA synthetase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_744_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(33649..33918)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 id=3223745 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
50S ribosomal protein L27P; K02899 large subunit ribosomal protein L27 Tax=GWF2_Bacteroidetes_41_31_curated
50S ribosomal protein L27P; K02899 large subunit ribosomal protein L27
08E140C01_z5_2013_Ig3399_v2_scaffold_744_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(33937..34248)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 id=3223743 bin=GWF2_Bacteroidetes_41_31 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
50S ribosomal protein L21p; K02888 large subunit ribosomal protein L21 Tax=GWF2_Bacteroidetes_41_31_curated
50S ribosomal protein L21p; K02888 large subunit ribosomal protein L21
08E140C01_z5_2013_Ig3399_v2_scaffold_744_28
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34340..35272)
DNA (933bp) protein (311aa)
Integral membrane protein DUF6 id=3223741 bin=GWF2_Bacteroidetes_41_31 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
permease Tax=GWF2_Bacteroidetes_41_31_curated
permease
08E140C01_z5_2013_Ig3399_v2_scaffold_744_29
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35518..36099
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=3223737 bin=GWF2_Bacteroidetes_41_31 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWF2_Bacteroidetes_41_31_curated
RNA polymerase, sigma-24 subunit, ECF subfamily
08E140C01_z5_2013_Ig3399_v2_scaffold_744_30
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36219..37202
DNA (984bp) protein (328aa)
Uncharacterized protein id=3223735 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
anti-sigma factor Tax=GWF2_Bacteroidetes_41_31_curated
anti-sigma factor
Displaying items 1-30 of 34 in total

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