ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_18338

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_18338_trna_1
unknown

Not on your lists

comp(52..125)
DNA (74bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_18338_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

242..802
DNA (561bp) protein (187aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2'-5' RNA ligase id=4161726 bin=GWF2_Bacteroidetes_41_31 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_18338_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(803..1087)
DNA (285bp) protein (95aa)
Membrane protein id=4759435 bin=GWA2_Ignavibacteria-rel_35_8 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_18338_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

1309..1887
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZFT6_9PORP
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_18338_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

1905..2351
DNA (447bp) protein (149aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
08E140C01_z5_2013_Ig3399_v2_scaffold_18338_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(4668..5117)
DNA (450bp) protein (150aa)
sugar-phosphate isomerase, RpiB/LacA/LacB family (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose 5-phosphate isomerase B n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H605_9BACT
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying 6 items

View Taxonomy