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08E140C01_z5_2013_Ig3399_v2_scaffold_1336

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_1
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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1..363
DNA (363bp) protein (121aa)
Nob1 protein {ECO:0000313|EMBL:AIZ57114.1}; EC=3.1.-.- {ECO:0000313|EMBL:AIZ57114.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Putative nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YN45_9EURY
putative nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_2
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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411..1262
DNA (852bp) protein (284aa)
Putative outer membrane protein n=1 Tax=Smithella sp. ME-1 RepID=V4F885_9DELT
mipA; putative lytic transglycosylase MltA-interacting protein MipA exported protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_3
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1292..1714
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4FHD3_9DELT
hypothetical protein; K08972 putative membrane protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_4
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1705..4329
DNA (2625bp) protein (875aa)
DNA mismatch repair protein MutS n=1 Tax=Smithella sp. ME-1 RepID=V4FBB5_9DELT
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4566..5162
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4Q6_GEOUR
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5431..6276)
DNA (846bp) protein (282aa)
RNA polymerase sigma factor RpoH n=1 Tax=Smithella sp. ME-1 RepID=V4FBP0_9DELT
RNA polymerase sigma-B factor; K03089 RNA polymerase sigma-32 factor
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_7
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6411..7283
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4EPK4_9DELT
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_8
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7294..9885
DNA (2592bp) protein (864aa)
ClpB protein n=1 Tax=Smithella sp. ME-1 RepID=V4F8K1_9DELT
clpB protein; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_9
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9943..10332
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4FHQ1_9DELT
cytoplasmic protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_10
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10313..11173
DNA (861bp) protein (287aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Smithella sp. ME-1 RepID=V4FBN5_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_trna_1
unknown

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11214..11285
DNA (72bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11314..12255
DNA (942bp) protein (314aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Ribose-phosphate pyrophosphokinase n=1 Tax=Smithella sp. ME-1 RepID=V4GSJ8_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_12
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12270..12923
DNA (654bp) protein (218aa)
50S ribosomal protein L25 n=1 Tax=Smithella sp. ME-1 RepID=V4ENR0_9DELT
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13008..13601
DNA (594bp) protein (198aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=PTH_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_14
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13605..16046
DNA (2442bp) protein (814aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Smithella sp. ME-1 RepID=V4FCW6_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_15
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16217..18067)
DNA (1851bp) protein (617aa)
Acetyltransferase, GNAT family n=1 Tax=delta proteobacterium NaphS2 RepID=D8F492_9DELT
putative 4-hydroxybutyrate CoA-transferase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_16
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18266..19351)
DNA (1086bp) protein (362aa)
Aryldialkylphosphatase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FHL5_DESAA rbh
aryldialkylphosphatase; K07048 phosphotriesterase-related protein rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_17
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19452..19958)
DNA (507bp) protein (169aa)
hypothetical protein id=73244 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_18
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20143..21498)
DNA (1356bp) protein (452aa)
replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase id=4454753 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_19
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21495..21944)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL9_SYNAS
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_20
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21981..22949)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YR93_9BACT
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_21
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23075..23344)
DNA (270bp) protein (90aa)
30S ribosomal protein S18 id=4474409 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_22
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23347..23820)
DNA (474bp) protein (158aa)
30S ribosomal protein S6 id=4474411 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_23
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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24046..24714
DNA (669bp) protein (223aa)
Putative aminotransferase-aldolase fusion protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H377_ACTM4
putative aminotransferase-aldolase fusion protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_24
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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24930..25550
DNA (621bp) protein (207aa)
Phosphate transport regulator n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY21_SYNAS
phosphate transport regulator; K07220 hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_25
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25637..26665)
DNA (1029bp) protein (343aa)
Sorbitol dehydrogenase n=1 Tax=Smithella sp. ME-1 RepID=V4FI63_9DELT
alcohol dehydrogenase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_1336_26
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(26662..27279)
DNA (618bp) protein (206aa)
aldolase; K08321 putative autoinducer-2 (AI-2) aldolase [EC:4.1.2.-]
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LL42_SYNFM
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Displaying 27 items

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