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08E140C01_z5_2013_Ig3399_v2_scaffold_2524

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_1
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..479)
DNA (477bp) protein (159aa)
biotin operon repressor / biotin--[acetyl-CoA-carboxylase] synthetase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin operon repressor / biotin--[acetyl-CoA-carboxylase] synthetase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUR4_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_2
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..1392)
DNA (840bp) protein (280aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUR3_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_3
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1483..4140)
DNA (2658bp) protein (886aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUR2_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_4
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4281..5453)
DNA (1173bp) protein (391aa)
Hypothetical membrane protein id=3750542 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5621..6553)
DNA (933bp) protein (311aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase 2 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MIAA2_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6559..8355)
DNA (1797bp) protein (599aa)
DNA mismatch repair protein MutL id=3750540 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_7
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8662..9555)
DNA (894bp) protein (298aa)
Hypothetical exported protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUR9_SYNAS rbh
hypothetical protein rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_8
unknown

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comp(9552..9695)
DNA (144bp) protein (48aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_2524_9
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9751..10197)
DNA (447bp) protein (149aa)
C_GCAxxG_C_C family protein id=4210077 bin=GWC2_Syntrophobacterales_56_13 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
C_GCAxxG_C_C family protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_10
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10460..13249
DNA (2790bp) protein (930aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase id=4205780 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13433..13930
DNA (498bp) protein (166aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=LSPA_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_12
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13943..14743)
DNA (801bp) protein (267aa)
Ferredoxin n=1 Tax=Smithella sp. ME-1 RepID=V4EQS1_9DELT
2-oxoacid:ferredoxin oxidoreductase, delta subunit
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14752..15147)
DNA (396bp) protein (132aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_14
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15818..16750
DNA (933bp) protein (311aa)
glpB1; anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3); K00112 glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
Anaerobic glycerol-3-phosphate dehydrogenase subunit B n=1 Tax=Smithella sp. ME-1 RepID=V4GTT9_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_15
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16925..17932)
DNA (1008bp) protein (336aa)
Peptidase M23 n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K053_CYAP8 rbh
peptidase M23 rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_16
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18158..18502)
DNA (345bp) protein (115aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_17
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18528..19763)
DNA (1236bp) protein (412aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E5I3_9FIRM
HlyD family type I secretion membrane fusion protein; K11003 hemolysin D
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_18
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19760..21862)
DNA (2103bp) protein (701aa)
type I secretion system ATPase (EC:3.6.3.43); K11004 ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Type I secretion system ATPase n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E461_9FIRM
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_19
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21837..23132)
DNA (1296bp) protein (432aa)
Outer membrane efflux protein n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E4S5_9FIRM
outer membrane efflux protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_2524_20
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23316..24131)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037AC6AF
hemolysin-type calcium-binding protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Displaying 20 items

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