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08E140C01_z5_2013_Ig3399_v2_scaffold_3722

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_1

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2..472
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037C4B12
Marine sediment metagenome DNA, contig: S06H3_L03668 {ECO:0000313|EMBL:GAI15776.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
efflux transporter, RND family, MFP subunit, relted to HlyD
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_2
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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826..1017
DNA (192bp) protein (64aa)
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
30S ribosomal protein S21 id=2520836 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_3
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1188..1838
DNA (651bp) protein (217aa)
Lysine decarboxylase family id=4091218 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
lysine decarboxylase family protein; K06966
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_4
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1872..3227
DNA (1356bp) protein (452aa)
DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] rbh
DNA polymerase III, delta subunit n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWS0_SYNAS rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3339..3881)
DNA (543bp) protein (181aa)
Putative cytosolic protein n=1 Tax=Smithella sp. ME-1 RepID=V4GTW8_9DELT
cytoplasmic protein; K06962
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4014..4871
DNA (858bp) protein (286aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxybutyryl-CoA dehydrogenase Hbd n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G0E2_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_7
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4949..5608)
DNA (660bp) protein (220aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase n=1 Tax=Smithella sp. ME-1 RepID=V4FBL0_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_8
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5782..7176
DNA (1395bp) protein (465aa)
3-deoxy-D-manno-octulosonic-acid transferase id=2520624 bin=GWC2_Syntrophobacterales_56_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
3-deoxy-D-manno-octulosonic-acid transferase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_9
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7295..8278
DNA (984bp) protein (328aa)
pyridoxal-5'-phosphate-dependent protein beta subunit; K01754 threonine dehydratase [EC:4.3.1.19]
threonine ammonia-lyase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6C8C2
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_10
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8394..10082
DNA (1689bp) protein (563aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
Glutamine--tRNA ligase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LS81_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10207..10968
DNA (762bp) protein (254aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3722_trna_1
unknown

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comp(11109..11179)
DNA (71bp)
transferRNA
Displaying 12 items

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