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08E140C01_z5_2013_Ig3399_v2_scaffold_3889

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_1
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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39..662
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL4_SYNAS
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_2
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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662..949
DNA (288bp) protein (96aa)
50S ribosomal protein L23 id=3999598 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_3
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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971..1792
DNA (822bp) protein (274aa)
50S ribosomal protein L2 id=3999596 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_4
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1799..2080
DNA (282bp) protein (94aa)
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
30S ribosomal protein S19 id=4167912 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2121..2453
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Smithella sp. ME-1 RepID=V4FBR3_9DELT
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2468..3115
DNA (648bp) protein (216aa)
30S ribosomal protein S3 id=4417663 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_7
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3180..3602
DNA (423bp) protein (141aa)
50S ribosomal protein L16 n=1 Tax=Smithella sp. ME-1 RepID=V4EPJ6_9DELT
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_8
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3592..3786
DNA (195bp) protein (65aa)
50S ribosomal protein L29 id=3999584 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_9
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3788..4045
DNA (258bp) protein (86aa)
30S ribosomal protein S17 id=4417660 bin=GWC2_Syntrophobacterales_56_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_10
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4097..4465
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=4417659 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4488..4811
DNA (324bp) protein (108aa)
LSU ribosomal protein L24p (L26e) n=1 Tax=Smithella sp. ME-1 RepID=V4F999_9DELT
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_12
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4818..5357
DNA (540bp) protein (180aa)
50S ribosomal protein L5 id=4417657 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5591..5992
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RS8_SYNAS
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_14
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6028..6570
DNA (543bp) protein (181aa)
50S ribosomal protein L6 id=4167903 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_15
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6606..6971
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL18_SYNAS
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_16
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6995..7492
DNA (498bp) protein (166aa)
30S ribosomal protein S5 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RS5_SYNAS
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_17
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7514..7702
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG71_9DELT
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_18
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7706..8152
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL15_SYNAS
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_19
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8154..9461
DNA (1308bp) protein (436aa)
Protein translocase subunit SecY id=4747442 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_20
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9488..10237
DNA (750bp) protein (250aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase id=4167897 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_3889_21
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10281..10499
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 id=4167896 bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
protein translation initiation factor 1; K02518 translation initiation factor IF-1
Tax=BJP_08E140C01_Syntrophobacterales_43_19
Displaying 21 items

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