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08E140C01_z5_2013_Ig3399_v2_scaffold_819

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_819_1
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..761
DNA (759bp) protein (253aa)
ATP synthase F0F1 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Smithella sp. ME-1 RepID=V4FH89_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_2
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

828..2396
DNA (1569bp) protein (523aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=1 Tax=Smithella sp. ME-1 RepID=V4FB70_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_3
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2383..3273
DNA (891bp) protein (297aa)
ATP synthase subunit gamma-like protein; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Smithella sp. ME-1 RepID=V4GSX0_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_4
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3300..4100
DNA (801bp) protein (267aa)
Putative cytosolic protein n=1 Tax=Smithella sp. ME-1 RepID=V4EP35_9DELT
cytoplasmic protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4145..4339
DNA (195bp) protein (65aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4340..5584)
DNA (1245bp) protein (415aa)
PAS domain S-box id=4721232 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
PAS domain S-box
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_7
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..6702)
DNA (876bp) protein (292aa)
Putative uncharacterized protein id=3362969 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydratase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_8
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6789..7235)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLS1_DESB2
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_9
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7269..8150)
DNA (882bp) protein (294aa)
RNA polymerase sigma factor n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2N1_9PLAN
ECF subfamily RNA polymerase sigma-24 subunit
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_10
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8411..8815
DNA (405bp) protein (135aa)
Rrf2 family protein id=4749240 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
rrf2 family protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8826..9911
DNA (1086bp) protein (362aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA 1 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MNMA1_SYNAS
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_12
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10210..11502
DNA (1293bp) protein (431aa)
O-acetyl-L-homoserine sulfhydrolase / O-acetyl-L-serine sulfhydrolase (EC:2.5.1.47); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetyl-L-homoserine sulfhydrolase / O-acetyl-L-serine sulfhydrolase id=3493226 bin=GWC2_Planctomycetes_45_44 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11567..12526
DNA (960bp) protein (320aa)
cysteine synthase A; K01738 cysteine synthase A [EC:2.5.1.47] rbh
Cysteine synthase id=1875818 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_14
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12786..13928
DNA (1143bp) protein (381aa)
cystathionine gamma-lyase (EC:4.4.1.1); K01760 cystathionine beta-lyase [EC:4.4.1.8]
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B703EB
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_15
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14039..14836
DNA (798bp) protein (266aa)
Formate dehydrogenase chain D (EC:1.2.1.2)
Formate dehydrogenase chain D n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0HZT9_9FIRM
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_16
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14937..15668
DNA (732bp) protein (244aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPI9_SYNAS
cobalt-zinc-cadmium resistance protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_17
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15681..16187)
DNA (507bp) protein (169aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_18
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16224..17084)
DNA (861bp) protein (287aa)
HD domain protein, putative id=2299858 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
HD domain protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_19
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17292..17912
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Smithella sp. ME-1 RepID=V4FIS6_9DELT
TetR family transcriptional regulator
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_20
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17902..19233
DNA (1332bp) protein (444aa)
Type I secretion outer membrane protein n=1 Tax=Smithella sp. ME-1 RepID=V4FCR8_9DELT
type I secretion outer membrane protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_21
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19269..20570
DNA (1302bp) protein (434aa)
Outer membrane efflux protein n=1 Tax=Smithella sp. ME-1 RepID=V4GUE2_9DELT
outer membrane efflux protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_22
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20615..21730
DNA (1116bp) protein (372aa)
HlyD family secretion protein n=1 Tax=Smithella sp. ME-1 RepID=V4EQM6_9DELT
RND family efflux transporter MFP subunit
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_23
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21717..24851
DNA (3135bp) protein (1045aa)
RND multidrug efflux transporter, Acriflavin resistance protein n=1 Tax=Smithella sp. ME-1 RepID=V4F9M3_9DELT
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_24
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24981..25271
DNA (291bp) protein (97aa)
Putative cytosolic protein n=1 Tax=Smithella sp. ME-1 RepID=V4FIS1_9DELT
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_25
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25957..27606
DNA (1650bp) protein (550aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_26
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27627..28976)
DNA (1350bp) protein (450aa)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_27
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29215..30144
DNA (930bp) protein (310aa)
Alpha/beta hydrolase family protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UL62_9LEPT
putative lipase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_28
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30199..31236)
DNA (1038bp) protein (346aa)
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Dual-specificity RNA methyltransferase RlmN id=4953699 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_29
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31229..32452)
DNA (1224bp) protein (408aa)
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] id=2808044 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
08E140C01_z5_2013_Ig3399_v2_scaffold_819_30
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32486..34420)
DNA (1935bp) protein (645aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] rbh
Aconitate hydratase id=3197212 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria rbh
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Displaying items 1-30 of 37 in total

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