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08E140C01_z5_2013_Ig3399_v2_scaffold_1265

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_1
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..1021
DNA (1020bp) protein (340aa)
Tetratricopeptide repeat domain protein id=1950583 bin=GWD2_Bacteroidetes_33_33 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
Two-component system-sensor histidine kinase Tax=GWD2_Bacteroidetes_33_33_curated
histidine kinase
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_2
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


comp(1096..1542)
DNA (447bp) protein (149aa)
30S ribosomal protein S16 id=4065400 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
30S ribosomal protein S16 Tax=GWF2_RIF_IGX_33_9_curated
30S ribosomal protein S16
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(1587..2927)
DNA (1341bp) protein (447aa)
Signal recognition particle protein id=4135169 bin=GWA2_Ignavibacteria-rel_35_8 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_4
unknown

Not on your lists

3028..3189
DNA (162bp) protein (54aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1265_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(3179..4630)
DNA (1452bp) protein (484aa)
Replicative DNA helicase id=4135165 bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured bacterium W5-47b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
replicative DNA helicase
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

4752..5855
DNA (1104bp) protein (368aa)
Response regulator receiver domain protein id=1925936 bin=GWB2_Ignavibacteria_35_12 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
response regulator receiver sensor signal transduction histidine kinase
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_7
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(5849..6571)
DNA (723bp) protein (241aa)
Hypothetical conserved protein id=2839430 bin=GWF2_Ignavibacteria_33_9 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

6682..7518
DNA (837bp) protein (279aa)
Putative uncharacterized protein id=2298833 bin=GWA2_Ignavibacteria-rel_35_8 species=Flavobacteria bacterium MS024-3C genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
dinuclear metal center protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

7527..8267
DNA (741bp) protein (247aa)
Zn-ribbon protein id=1732396 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Zn-ribbon protein; K07164 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Zn-ribbon protein; K07164
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

8703..9005
DNA (303bp) protein (101aa)
hypothetical protein id=1732394 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_11
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

9015..9497
DNA (483bp) protein (161aa)
id=3317024 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
id=3317024 Tax=GWF2_RIF_IGX_33_9_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(9489..10511)
DNA (1023bp) protein (341aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] rbh
Holliday junction ATP-dependent DNA helicase RuvB id=2156228 bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(10504..11499)
DNA (996bp) protein (332aa)
Predicted divalent cation transporter id=2156229 bin=GWB2_Ignavibacteria_35_12 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
cation diffusion facilitator family transporter Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
cation diffusion facilitator family transporter
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(11513..11974)
DNA (462bp) protein (154aa)
ATPase; K06925 UPF0079 ATP-binding protein id=7717776 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein; K06925 UPF0079 ATP-binding protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(12012..13583)
DNA (1572bp) protein (524aa)
Response regulator id=2098175 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Response regulator
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

13787..15097
DNA (1311bp) protein (437aa)
clpB; ATP-dependent Clp protease ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
clpB; ATP-dependent Clp protease ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=7717779 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
clpB; ATP-dependent Clp protease ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

15167..17044
DNA (1878bp) protein (626aa)
Uncharacterized protein id=4017372 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_18
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

17041..17445
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PHC6_9PORP
Anti-sigma regulatory factor
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_19
unknown

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17442..19544
DNA (2103bp) protein (701aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1265_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(19541..20182)
DNA (642bp) protein (214aa)
Pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5) Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
pdxH; pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase id=5030730 bin=GWA2_Ignavibacteria-rel_35_8 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_21
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(20175..21596)
DNA (1422bp) protein (474aa)
aminotransferase (EC:2.6.1.-) Tax=RBG_13_Caldithrix_44_9_curated
Aminotransferase class V n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRS8_9BACT rbh
selenocysteine lyase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_22
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(21644..22021)
DNA (378bp) protein (126aa)
Glycine cleavage system H protein id=5030728 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
glycine cleavage system H protein; K02437 glycine cleavage system H protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_23
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22122..22343
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-D02 RepID=UPI00036AAAB4
Tax=BJP_IG2102_Porphyrobacter_62_18
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_24
unknown

Not on your lists

comp(22340..22885)
DNA (546bp) protein (182aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1265_25
unknown

Not on your lists

comp(22836..23294)
DNA (459bp) protein (153aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1265_26
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(23393..24742)
DNA (1350bp) protein (450aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase id=2098075 bin=GWB2_Ignavibacteria_35_12 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_27
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(24749..25252)
DNA (504bp) protein (168aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein id=4368867 bin=GWF2_Ignavibacteria_33_9 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_28
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(25349..25999)
DNA (651bp) protein (217aa)
Elongation factor P id=4791499 bin=GWA2_Ignavibacteria-rel_35_8 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
translation elongation factor P
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_trna_1
unknown

Not on your lists

comp(25943..26013)
DNA (71bp)
transferRNA
08E140C01_z5_2013_Ig3399_v2_scaffold_1265_29
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(26081..26764)
DNA (684bp) protein (228aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FAF3_9PORP
Displaying items 1-30 of 33 in total

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