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08E140C01_z5_2013_Ig3399_v2_scaffold_1625

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_1
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..1170
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANC9_IGNAJ
hypothetical protein Tax=GWB2_Ignavibacteria_35_6b_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_2
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1174..1359)
DNA (186bp) protein (62aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(1361..2548)
DNA (1188bp) protein (396aa)
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit id=4440464 bin=GWF2_Ignavibacteria_33_9 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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2591..3067
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WI17_GEOS8
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

3086..3973
DNA (888bp) protein (296aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase NAD-binding id=2207377 bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_6
unknown

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comp(4189..4602)
DNA (414bp) protein (138aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1625_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4671..5627)
DNA (957bp) protein (319aa)
id=1976564 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
id=1976564 Tax=GWE2_Bacteroidetes_42_39_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_8
unknown

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5941..6702
DNA (762bp) protein (254aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1625_9
unknown

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6901..7434
DNA (534bp) protein (178aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1625_10
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7567..8022
DNA (456bp) protein (152aa)
N-acetyltransferase GCN5; K09994 PhnO protein [EC:2.3.1.-]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036533C3
Uncharacterized protein {ECO:0000313|EMBL:EZH71881.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_11
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8176..8652
DNA (477bp) protein (159aa)
N-acetyltransferase GCN5; K09994 PhnO protein [EC:2.3.1.-]
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036DBC5E
Uncharacterized protein {ECO:0000313|EMBL:EZH71881.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_12
unknown

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8767..9327
DNA (561bp) protein (187aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1625_13
unknown

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comp(9515..10150)
DNA (636bp) protein (212aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1625_14
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10315..13782
DNA (3468bp) protein (1156aa)
methylmalonyl-CoA mutase; K11942 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase, N-terminal:Methylmalonyl-CoA mutase, C-terminal n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGB3_9BACT rbh
Methylmalonyl-CoA mutase, N-terminal:Methylmalonyl-CoA mutase, C-terminal {ECO:0000313|EMBL:EAY30530.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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13882..15924
DNA (2043bp) protein (681aa)
Fe-S oxidoreductase id=7717836 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Fe-S oxidoreductase
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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15926..16594
DNA (669bp) protein (223aa)
transmembrane protein id=17132902 bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_17
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(16591..16977)
DNA (387bp) protein (129aa)
putative thiol-disulfide oxidoreductase DCC Tax=GWA2_RIF03_38_11_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(16974..18248)
DNA (1275bp) protein (425aa)
purD; Phosphoribosylamine-glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
purD; Phosphoribosylamine-glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase id=2238320 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_19
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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18462..19004
DNA (543bp) protein (181aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0N7_EMTOG
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFK05490.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_20
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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19115..19717
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AKU8_FLELS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM04583.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_21
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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19817..20551
DNA (735bp) protein (245aa)
Putative manganese transport protein n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26CX7_FLABB rbh
BRAMP {ECO:0000313|EMBL:GAK89150.1}; TaxID=906888 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ulvanivorans.;"
NADPH-dependent FMN reductase rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_22
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


20752..21837
DNA (1086bp) protein (362aa)
Protein RecA id=2223236 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
Recombination protein RecA
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_23
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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21841..22467
DNA (627bp) protein (209aa)
Regulatory protein RecX id=2669889 bin=GWA2_Ignavibacteria-rel_35_8 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
recX; regulatory protein RecX Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
recX; regulatory protein recX; K03565 regulatory protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1625_24
unknown

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comp(22516..22908)
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying 24 items

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