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08E140C01_z5_2013_Ig3399_v2_scaffold_1723

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_1
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2..517
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JHQ9_9BACT
Amino acid racemase {ECO:0000313|EMBL:KJS06885.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
putative amino acid racemase
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_2
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(514..1368)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U5E4_CROAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAP87461.1}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_3
unknown

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comp(1418..2251)
DNA (834bp) protein (278aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1723_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(2272..2718)
DNA (447bp) protein (149aa)
Single-stranded DNA-binding protein id=3590239 bin=GWF2_Ignavibacteria_33_9 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
ssb; ssDNA-binding protein; K03111 single-strand DNA-binding protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_5
unknown

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comp(2843..3079)
DNA (237bp) protein (79aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1723_6
unknown

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comp(3076..3426)
DNA (351bp) protein (117aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1723_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(3413..3784)
DNA (372bp) protein (124aa)
Flagellar protein FlaG id=2254339 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
flagellar protein FlaG; K06603 flagellar protein FlaG Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
flagellar protein FlaG protein; K06603 flagellar protein FlaG
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(3828..5249)
DNA (1422bp) protein (474aa)
Flagellar hook-associated 2 domain-containing protein id=2254341 bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
fliD; A-type flagellar hook-associated protein 2; K02407 flagellar hook-associated protein 2
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(5258..5614)
DNA (357bp) protein (119aa)
Putative uncharacterized protein id=2254342 bin=GWB2_Ignavibacteria_35_12 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein; K02422 flagellar protein FliS
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5729..6661)
DNA (933bp) protein (311aa)
Similar to flagellar filament 31K core protein FlaB3 id=2254344 bin=GWB2_Ignavibacteria_35_12 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
flagellin domain-containing protein; K02406 flagellin Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
flagellin
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_11
unknown

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comp(6784..7368)
DNA (585bp) protein (195aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1723_12
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(7478..8854)
DNA (1377bp) protein (459aa)
putative cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=GWA2_Bdellovibrionales_49_15_curated
putative cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] rbh
Putative cystathionine beta-synthase id=2185283 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria rbh
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(8996..11116)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EZN7_EMTOG
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_14
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11543..11881
DNA (339bp) protein (113aa)
phnA; alkylphosphonate uptake protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
phosphonoacetate hydrolase n=1 Tax=Cytophaga aurantiaca RepID=UPI000376A8B3
Phosphonoacetate hydrolase {ECO:0000313|EMBL:KIF34050.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_15
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(11991..13991)
DNA (2001bp) protein (667aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein id=2580149 bin=GWF2_Ignavibacteria_33_9 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
OmpA/MotB domain-containing protein Tax=GWF2_RIF_IGX_33_9_curated
OmpA/MotB domain-containing protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(13993..14916)
DNA (924bp) protein (308aa)
id=7718346 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
PKD domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_17
Podospora anserina, Podospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(14888..20047)
DNA (5160bp) protein (1720aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PJD3_DICFS
Uncharacterized protein {ECO:0000313|EMBL:CDP24287.1}; TaxID=515849 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora.;" source="Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383); (Pleurage anserina).;"
hypothetical protein
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_18
unknown

Not on your lists

20242..20355
DNA (114bp) protein (38aa)

This feature has no annotations

08E140C01_z5_2013_Ig3399_v2_scaffold_1723_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20485..20901
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMW8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55246.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
iron sulfur-containing domain, cdgsh-type
08E140C01_z5_2013_Ig3399_v2_scaffold_1723_20
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


21006..21890
DNA (885bp) protein (295aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=GWF2_RIF_IGX_33_9_curated
Alanine--tRNA ligase id=3316938 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
alanyl-tRNA synthetase
Displaying 20 items

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